9VLR | pdb_00009vlr

Acinetobacter baumannii membrane-bound lytic transglycosylase B

PDB DOI: https://doi.org/10.2210/pdb9VLR/pdb

Classification: LYASE
Organism(s): Acinetobacter baumannii
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2025-06-26 Released: 2026-07-01
Deposition Author(s): Jang, H.S., Park, H.H.
Funding Organization(s): National Research Foundation (NRF, Korea)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.79 Å
R-Value Free:
0.205 (Depositor), 0.210 (DCC)
R-Value Work:
0.182 (Depositor), 0.188 (DCC)

Starting Model: experimental
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This is version 1.0 of the entry. See complete history.

Literature

Acinetobacter baumannii membrane-bound lytic transglycosylase B

Jang, H.S., Park, H.H.

To be published.

Macromolecule Content

Total Structure Weight: 35.11 kDa
Atom Count: 2,687
Modeled Residue Count: 308
Deposited Residue Count: 315
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Lytic murein transglycosylase B	A	315	Acinetobacter baumannii	Mutation(s): 0 Gene Names: mltB, EA722_03950
UniProt
Find proteins for A0A3R9RFD2 (Acinetobacter baumannii) Explore A0A3R9RFD2 Go to UniProtKB: A0A3R9RFD2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A0A3R9RFD2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.79 Å
R-Value Free: 0.205 (Depositor), 0.210 (DCC)
R-Value Work: 0.182 (Depositor), 0.188 (DCC)

Space Group: P 4₃ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 75.49	α = 90
b = 75.49	β = 90
c = 175.36	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
PDB_EXTRACT	data extraction
XDS	data scaling

Structure Validation

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Entry History

& Funding Information

Deposition Data

Released Date: 2026-07-01

Deposition Author(s):

Funding Organization	Location	Grant Number
National Research Foundation (NRF, Korea)	Korea, Republic Of	--

Revision History (Full details and data files)

Version 1.0: 2026-07-01
Type: Initial release

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.