9I25 | pdb_00009i25

WxLIP from Enterococcus faecium locus A bound to long WxL

PDB DOI: https://doi.org/10.2210/pdb9I25/pdb

Classification: CELL ADHESION
Organism(s): Enterococcus faecium DO
Expression System: Escherichia coli BL21(DE3)
Mutation(s): No

Deposited: 2025-01-17 Released: 2026-01-28
Deposition Author(s): Williamson, M.P., Hassan, M.U.
Funding Organization(s): Other private

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 1.91 Å
R-Value Free:
0.261 (Depositor), 0.258 (DCC)
R-Value Work:
0.217 (Depositor), 0.215 (DCC)

Starting Model: in silico
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wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Interactions and function of the bacterial WxL protein

Williamson, M.P., Hassan, M.U.

To be published.

Macromolecule Content

Total Structure Weight: 55.02 kDa
Atom Count: 2,174
Modeled Residue Count: 264
Deposited Residue Count: 503
Unique protein chains: 2

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
EfmWxLIP1	A [auth C]	277	Enterococcus faecium DO	Mutation(s): 0 Gene Names: EFLFYP64_00745
UniProt
Find proteins for A0A6N3AEW7 (Enterococcus faecium) Explore A0A6N3AEW7 Go to UniProtKB: A0A6N3AEW7
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A6N3AEW7
Sequence Annotations Expand
Reference Sequence

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
WxL domain surface protein	B [auth A]	226	Enterococcus faecium DO	Mutation(s): 0 Gene Names: HMPREF0351_12114
UniProt
Find proteins for Q3Y1R0 (Enterococcus faecium (strain ATCC BAA-472 / TX0016 / DO)) Explore Q3Y1R0 Go to UniProtKB: Q3Y1R0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q3Y1R0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 1.91 Å
R-Value Free: 0.261 (Depositor), 0.258 (DCC)
R-Value Work: 0.217 (Depositor), 0.215 (DCC)

Space Group: P 6₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 105.147	α = 90
b = 105.147	β = 90
c = 67.172	γ = 120

Software Package:

Software Name	Purpose
REFMAC	refinement
xia2	data reduction
xia2	data scaling
PHASER	phasing

Structure Validation

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Entry History & Funding Information

Deposition Data

Released Date: 2026-01-28

Deposition Author(s):

Williamson, M.P.

Funding Organization	Location	Grant Number
Other private	United Kingdom	--

Revision History (Full details and data files)

Version 1.0: 2026-01-28
Type: Initial release

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.