9GJJ | pdb_00009gjj

Experimental Data Snapshot

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Macromolecule Content

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Galactose/N-acetyl-D-galactosamine lectin heavy subunit 1	A [auth H]	820	Entamoeba histolytica HM-1:IMSS	Mutation(s): 0
UniProt
Find proteins for P32022 (Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)) Explore P32022 Go to UniProtKB: P32022
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P32022
Glycosylation
Glycosylation Sites: 5	Glycosylation Focus chain A [auth H]
Sequence Annotations Expand
Reference Sequence

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(by identity cutoff) | 3D Structure

Entity ID: 2
Molecule	Chains	Sequence Length	Organism	Details	Image
Galactose/N-acetyl-D-galactosamine lectin light subunit 1	B [auth L]	288	Entamoeba histolytica HM-1:IMSS	Mutation(s): 0
UniProt
Find proteins for Q03077 (Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)) Explore Q03077 Go to UniProtKB: Q03077
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q03077
Sequence Annotations Expand
Reference Sequence

Oligosaccharides

Entity ID: 3
Molecule	Chains	Length	2D Diagram	Glycosylation	3D Interactions
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	C [auth A]	3		N-Glycosylation	Interactions Focus chain C [auth A] Interactions & Density Focus chain C [auth A]

Entity ID: 4
Molecule	Chains	Length	2D Diagram	Glycosylation	3D Interactions
alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	D [auth B]	7		N-Glycosylation	Interactions Focus chain D [auth B] Interactions & Density Focus chain D [auth B]

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
NAG Query on NAG Download Ideal Coordinates CCD File SDF format, chain E [auth H] SDF format, chain F [auth H] SDF format, chain G [auth H] MOL2 format, chain E [auth H] MOL2 format, chain F [auth H] MOL2 format, chain G [auth H] mmCIF format, chain E [auth H] mmCIF format, chain F [auth H] mmCIF format, chain G [auth H]	E [auth H], F [auth H], G [auth H]	2-acetamido-2-deoxy-beta-D-glucopyranose C₈ H₁₅ N O₆ OVRNDRQMDRJTHS-FMDGEEDCSA-N		Interactions Focus chain E [auth H] Focus chain F [auth H] Focus chain G [auth H] Interactions & Density Focus chain E [auth H] Focus chain F [auth H] Focus chain G [auth H]
GAL (Subject of Investigation/LOI) Query on GAL Download Ideal Coordinates CCD File SDF format, chain H [auth L] MOL2 format, chain H [auth L] mmCIF format, chain H [auth L]	H [auth L]	beta-D-galactopyranose C₆ H₁₂ O₆ WQZGKKKJIJFFOK-FPRJBGLDSA-N		Interactions Focus chain H [auth L] Interactions & Density Focus chain H [auth L]