5NB3 | pdb_00005nb3


PEB: PHYCOERYTHROBILIN

PEB is a Ligand Of Interest in 5NB3 designated by the RCSB
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Best-fitted instance in this entry
Other instances in this entry
Best-fitted instance in this entry
Best-fitted PDB instances with same target (top 5)
Best-fitted instance in this entry
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
5NB3_PEB_A_166 99% 7% 0.041 0.9753.11 1.83 10 1400100%1
5NB3_PEB_F_166 99% 6% 0.042 0.9742.98 2.09 9 18 00100%1
5NB3_PEB_H_166 99% 5% 0.044 0.9763.1 2.3 8 1550100%1
5NB3_PEB_G_166 99% 7% 0.043 0.9742.86 2.04 8 1150100%1
5NB3_PEB_P_188 99% 8% 0.044 0.9742.64 1.99 9 1690100%1
5NB3_PEB_L_166 99% 4% 0.044 0.9723.45 2.28 11 1350100%1
5NB3_PEB_W_186 99% 6% 0.047 0.9752.86 2.2 8 20 20100%1
5NB3_PEB_V_188 99% 9% 0.046 0.9732.75 1.8 12 1250100%1
5NB3_PEB_M_187 98% 7% 0.047 0.9712.94 1.9 10 18 40100%1
5NB3_PEB_G_167 98% 6% 0.047 0.9713.4 1.8 9 1350100%1
5NB3_PEB_C_166 98% 4% 0.046 0.9693.23 2.35 9 1760100%1
5NB3_PEB_J_166 98% 6% 0.047 0.972.93 2.27 10 1530100%1
5NB3_PEB_P_186 98% 5% 0.052 0.9743.37 2.12 9 1450100%1
5NB3_PEB_D_166 98% 6% 0.047 0.9692.94 2.13 9 1130100%1
5NB3_PEB_M_186 98% 5% 0.05 0.9723.43 2 11 1530100%1
5NB3_PEB_F_167 98% 6% 0.049 0.973.21 1.84 10 1250100%1
5NB3_PEB_W_188 98% 7% 0.049 0.9693.06 1.85 9 1370100%1
5NB3_PEB_B_166 98% 5% 0.048 0.9683.25 2.16 9 1430100%1
5NB3_PEB_O_188 98% 6% 0.048 0.9682.92 2.08 10 13100100%1
5NB3_PEB_K_166 98% 6% 0.048 0.9683.18 1.93 8 1350100%1
5NB3_PEB_N_186 98% 5% 0.052 0.9713.27 2.11 11 1650100%1
5NB3_PEB_E_166 98% 4% 0.05 0.9693.5 2.25 11 1460100%1
5NB3_PEB_A_167 98% 5% 0.051 0.972.92 2.29 11 18 30100%1
5NB3_PEB_M_188 98% 8% 0.05 0.9682.93 1.82 10 1550100%1
5NB3_PEB_U_186 98% 6% 0.053 0.9713.1 1.89 9 1150100%1
5NB3_PEB_W_187 97% 6% 0.052 0.9693.15 2.06 8 1670100%1
5NB3_PEB_V_187 97% 6% 0.051 0.9673.22 1.77 8 1100100%1
5NB3_PEB_V_186 97% 6% 0.053 0.9683.3 1.84 11 930100%1
5NB3_PEB_Q_188 97% 7% 0.05 0.9652.85 2.11 12 1570100%1
5NB3_PEB_E_167 97% 5% 0.054 0.9683.32 1.95 9 18 50100%1
5NB3_PEB_O_186 97% 4% 0.054 0.9673.46 2.19 9 1530100%1
5NB3_PEB_S_188 97% 6% 0.051 0.9633.28 1.87 10 1540100%1
5NB3_PEB_B_167 96% 4% 0.053 0.9643.16 2.68 10 18 40100%1
5NB3_PEB_X_188 96% 7% 0.053 0.9642.93 1.86 12 13110100%1
5NB3_PEB_N_187 96% 7% 0.053 0.9633.15 1.74 10 1070100%1
5NB3_PEB_U_187 96% 8% 0.056 0.9662.89 1.72 7 1360100%1
5NB3_PEB_N_188 96% 5% 0.054 0.9633.28 1.96 14 1540100%1
5NB3_PEB_X_186 96% 5% 0.055 0.9643.27 2.14 10 1040100%1
5NB3_PEB_Q_187 96% 7% 0.058 0.9673.13 1.76 9 1170100%1
5NB3_PEB_X_187 96% 6% 0.053 0.9613.22 1.79 11 1450100%1
5NB3_PEB_Q_186 96% 5% 0.057 0.9653.38 1.91 10 1260100%1
5NB3_PEB_P_187 96% 9% 0.06 0.9672.53 1.96 10 1330100%1
5NB3_PEB_H_167 96% 7% 0.057 0.9633.02 1.92 9 1150100%1
5NB3_PEB_I_166 95% 4% 0.056 0.963.4 2.34 9 1550100%1
5NB3_PEB_U_188 95% 5% 0.056 0.963.47 1.8 10 16110100%1
5NB3_PEB_S_187 95% 7% 0.057 0.9613.05 1.91 10 1550100%1
5NB3_PEB_O_187 95% 5% 0.058 0.9623.29 2.02 8 1540100%1
5NB3_PEB_D_167 95% 5% 0.058 0.963.09 2.4 10 1750100%1
5NB3_PEB_S_186 95% 6% 0.06 0.9623.31 1.83 9 1330100%1
5NB3_PEB_T_187 93% 5% 0.064 0.963.28 2.1 11 1750100%1
5NB3_PEB_T_186 93% 5% 0.065 0.9593.29 2.09 10 1450100%1
5NB3_PEB_K_167 92% 6% 0.063 0.9552.94 2.23 8 18 40100%1
5NB3_PEB_C_167 92% 5% 0.065 0.9563.08 2.2 9 18 30100%1
5NB3_PEB_I_167 92% 6% 0.064 0.9543.24 1.89 10 1360100%1
5NB3_PEB_T_188 92% 6% 0.064 0.9523.08 2.07 11 18 80100%1
5NB3_PEB_R_186 90% 5% 0.068 0.9513.22 2.06 8 1340100%1
5NB3_PEB_R_187 90% 5% 0.069 0.9513.39 1.92 10 1230100%1
5NB3_PEB_R_188 89% 6% 0.069 0.9483.27 1.9 10 1570100%1
5NB3_PEB_L_167 89% 4% 0.069 0.9483.23 2.43 11 1640100%1
5NB3_PEB_J_167 84% 4% 0.078 0.9383.53 2.1 12 1440100%1
5NB4_PEB_V_188 100% 15% 0.042 0.9822.34 1.44 10 710100%1
7AP5_PEB_DDD_203 90% 30% 0.086 0.971.53 1.25 2 600100%1
5AQD_PEB_H_167 89% 5% 0.079 0.9583.32 2.04 11 1420100%1
5FVB_PEB_L_202 88% 5% 0.087 0.9643.26 2 8 1410100%1
3V57_PEB_B_205 95% 4% 0.065 0.9673.31 2.5 9 1600100%1
7SSF_PEB_A_101 93% 4% 0.073 0.9663.39 2.19 25 1540100%1
7SUT_PEB_B_203 93% 4% 0.072 0.9653.83 1.96 26 1670100%1
4LMX_PEB_H_203 92% 12% 0.077 0.9682.37 1.76 6 1120100%1