Ligand validation:5NB4

MPD: (4S)-2-METHYL-2,4-PENTANEDIOL

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5NB4_MPD_X_204	64%	68%	0.107	0.903	0.36	0.87	-	1	0	0	100%	0.5
5NB4_MPD_W_204	47%	67%	0.138	0.878	0.21	1.05	-	-	1	0	100%	0.5
5NB4_MPD_M_204	41%	64%	0.143	0.859	0.19	1.17	-	1	0	0	100%	0.5
5NB4_MPD_U_204	40%	66%	0.159	0.869	0.34	0.95	-	-	0	0	100%	0.5
5NB4_MPD_P_204	39%	69%	0.142	0.849	0.28	0.9	-	-	0	0	100%	0.5
5NB4_MPD_S_204	36%	75%	0.142	0.834	0.25	0.72	-	-	0	0	100%	0.5
5NB4_MPD_Q_204	30%	59%	0.154	0.818	0.6	0.98	-	-	2	0	100%	0.5
5NB4_MPD_B_203	28%	39%	0.172	0.824	0.61	1.72	-	2	0	0	100%	0.5
5NB4_MPD_O_204	20%	42%	0.196	0.794	0.91	1.35	-	1	3	0	100%	0.5
5NB4_MPD_R_204	12%	53%	0.233	0.756	0.17	1.62	-	2	0	0	100%	0.5
5NB3_MPD_N_205	41%	76%	0.154	0.868	0.32	0.61	-	-	0	0	100%	0.5
9D77_MPD_A_505	100%	87%	0.032	0.998	0.16	0.52	-	-	1	0	100%	1
9H8Q_MPD_B_602	100%	82%	0.039	0.988	0.35	0.44	-	-	3	0	100%	1
9I7H_MPD_B_101	100%	69%	0.041	0.987	0.27	0.92	-	-	3	0	100%	1
9MMI_MPD_B_301	100%	79%	0.04	0.983	0.3	0.56	-	-	4	0	100%	1
2BJK_MPD_A_1520	99%	68%	0.046	0.985	0.64	0.58	-	-	2	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.