GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3RYI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3RYI_GDP_D_600 | 91% | 31% | 0.102 | 0.988 | 1.19 | 1.55 | 3 | 6 | 2 | 0 | 100% | 1 |
| 3RYI_GDP_B_600 | 71% | 37% | 0.154 | 0.977 | 1.01 | 1.43 | 1 | 5 | 2 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9F07_GDP_F_501 | 100% | 59% | 0.042 | 0.986 | 0.78 | 0.79 | - | 1 | 1 | 0 | 100% | 1 |
| 4O4H_GDP_B_501 | 100% | 42% | 0.045 | 0.986 | 0.97 | 1.29 | 2 | 5 | 0 | 0 | 100% | 1 |
| 4LNU_GDP_B_501 | 99% | 55% | 0.047 | 0.983 | 0.71 | 1.01 | 1 | 2 | 0 | 0 | 100% | 1 |
| 6QTN_GDP_B_501 | 99% | 47% | 0.048 | 0.984 | 0.94 | 1.11 | 2 | 3 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
