UPG: URIDINE-5'-DIPHOSPHATE-GLUCOSE
UPG is a Ligand Of Interest in 3KHU designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3KHU_UPG_E_502 | 86% | 33% | 0.096 | 0.964 | 1.15 | 1.5 | 4 | 9 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_F_501 | 86% | 21% | 0.102 | 0.97 | 1.78 | 1.57 | 10 | 7 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_A_501 | 84% | 40% | 0.118 | 0.98 | 0.88 | 1.44 | 1 | 5 | 2 | 0 | 100% | 1 |
| 3KHU_UPG_C_501 | 82% | 29% | 0.13 | 0.985 | 0.94 | 1.88 | 1 | 12 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_D_501 | 79% | 28% | 0.136 | 0.984 | 0.96 | 1.88 | - | 11 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_B_502 | 79% | 37% | 0.109 | 0.954 | 0.91 | 1.55 | - | 6 | 3 | 0 | 100% | 1 |
| 3KHU_UPG_D_502 | 77% | 32% | 0.117 | 0.958 | 1.15 | 1.54 | 4 | 8 | 1 | 0 | 100% | 1 |
| 3KHU_UPG_E_501 | 77% | 33% | 0.143 | 0.982 | 1.17 | 1.46 | 3 | 7 | 3 | 0 | 100% | 1 |
| 3KHU_UPG_A_502 | 75% | 29% | 0.116 | 0.95 | 1.07 | 1.76 | 3 | 9 | 1 | 0 | 100% | 1 |
| 3KHU_UPG_B_501 | 74% | 36% | 0.149 | 0.979 | 0.92 | 1.59 | 1 | 10 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_C_502 | 71% | 18% | 0.126 | 0.946 | 1.37 | 2.13 | 3 | 15 | 0 | 0 | 100% | 1 |
| 3KHU_UPG_F_502 | 65% | 20% | 0.123 | 0.926 | 1.31 | 2.05 | 6 | 14 | 2 | 0 | 100% | 1 |
| 2Q3E_UPG_C_501 | 98% | 34% | 0.055 | 0.98 | 1.2 | 1.39 | 1 | 6 | 2 | 0 | 100% | 1 |
| 6C5Z_UPG_F_501 | 97% | 35% | 0.059 | 0.971 | 1.2 | 1.35 | 2 | 6 | 2 | 0 | 100% | 1 |
| 4EDF_UPG_B_501 | 85% | 41% | 0.101 | 0.968 | 0.9 | 1.37 | 2 | 5 | 0 | 0 | 100% | 1 |
| 6C5A_UPG_F_502 | 79% | 34% | 0.133 | 0.98 | 1.19 | 1.4 | 3 | 6 | 2 | 0 | 100% | 1 |
| 6C4J_UPG_A_502 | 77% | 34% | 0.142 | 0.981 | 1.22 | 1.37 | 2 | 5 | 1 | 0 | 100% | 1 |
| 9YFK_UPG_A_401 | 100% | 41% | 0.028 | 0.994 | 1.09 | 1.22 | 2 | 4 | 0 | 0 | 100% | 1 |
| 8VRF_UPG_A_506 | 100% | 60% | 0.04 | 0.985 | 0.7 | 0.84 | - | - | 0 | 0 | 100% | 1 |
| 3JSZ_UPG_A_526 | 100% | 39% | 0.042 | 0.983 | 0.94 | 1.41 | 1 | 5 | 0 | 0 | 100% | 1 |
| 3SRZ_UPG_A_556 | 99% | 34% | 0.049 | 0.98 | 1.04 | 1.54 | 3 | 8 | 3 | 0 | 100% | 1 |
| 8UAG_UPG_A_504 | 99% | 5% | 0.049 | 0.978 | 3.87 | 1.44 | 16 | 5 | 0 | 0 | 100% | 1 |














