UMP: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE
UMP is a Ligand Of Interest in 3DL5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3DL5_UMP_C_611 | 48% | 8% | 0.184 | 0.928 | 2.32 | 2.28 | 3 | 9 | 3 | 0 | 100% | 1 |
| 3DL5_UMP_B_607 | 46% | 8% | 0.191 | 0.928 | 2.33 | 2.26 | 3 | 8 | 3 | 0 | 100% | 1 |
| 3DL5_UMP_D_615 | 41% | 8% | 0.201 | 0.919 | 2.33 | 2.27 | 3 | 8 | 4 | 0 | 100% | 1 |
| 3DL5_UMP_A_603 | 37% | 8% | 0.222 | 0.922 | 2.31 | 2.27 | 3 | 9 | 4 | 0 | 100% | 1 |
| 3DL5_UMP_E_619 | 35% | 8% | 0.19 | 0.876 | 2.34 | 2.28 | 3 | 8 | 6 | 0 | 100% | 1 |
| 2OIP_UMP_B_607 | 75% | 10% | 0.113 | 0.946 | 2.29 | 2.09 | 3 | 9 | 2 | 0 | 100% | 1 |
| 3DL6_UMP_D_615 | 57% | 9% | 0.172 | 0.947 | 2.36 | 2.04 | 3 | 9 | 3 | 0 | 100% | 1 |
| 1SEJ_UMP_E_619 | 56% | 6% | 0.175 | 0.949 | 2.84 | 2.18 | 7 | 9 | 2 | 0 | 100% | 1 |
| 1QZF_UMP_E_619 | 38% | 5% | 0.216 | 0.918 | 3 | 2.21 | 6 | 9 | 6 | 0 | 100% | 1 |
| 3HJ3_UMP_C_611 | 5% | 6% | 0.357 | 0.78 | 2.96 | 2.18 | 5 | 9 | 9 | 0 | 100% | 1 |
| 3TQ4_UMP_A_777 | 100% | 32% | 0.038 | 0.99 | 1.04 | 1.65 | 1 | 8 | 0 | 0 | 100% | 0.8 |
| 3TPY_UMP_A_154 | 100% | 40% | 0.041 | 0.993 | 0.89 | 1.44 | 1 | 5 | 0 | 0 | 100% | 0.3 |
| 3TQ5_UMP_A_777 | 100% | 22% | 0.046 | 0.989 | 1.35 | 1.9 | 3 | 6 | 0 | 0 | 100% | 1 |
| 3TQ3_UMP_A_777 | 100% | 38% | 0.049 | 0.99 | 0.91 | 1.5 | 1 | 5 | 0 | 0 | 100% | 0.3 |
| 3TRN_UMP_A_777 | 99% | 30% | 0.047 | 0.987 | 1.2 | 1.58 | 2 | 6 | 0 | 0 | 100% | 1 |
