1K35 | pdb_00001k35

Crystal Structure of Phosphomannomutase/Phosphoglucomutase from P.aeruginosa

X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1	VAPOR DIFFUSION, HANGING DROP	7	298	Na, K tartrate, MOPS, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K

Crystal Properties
Matthews coefficient	Solvent content
2.41	48.5

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 71.038	α = 90
b = 73.263	β = 90
c = 92.354	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	100	CCD	ADSC QUANTUM 4			M	MAD

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	NSLS BEAMLINE X8C	0.979151	NSLS	X8C

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.2	40	96.5	0.011	27.8	7.6	24319	24319			43.1

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
	2.2	2.28	98.7		0.331	5.8

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Free (Depositor)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MAD	THROUGHOUT	2.2	40	21818	21818	1177	91.6	0.23773	0.23539	0.28187	RANDOM	43.135

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.38			-0.23		0.61

RMS Deviations
Key	Refinement Restraint Deviation
p_multtor_nbd	19.692
p_singtor_nbd	3.898
p_scangle_it	3.165
p_scbond_it	1.983
p_angle_deg	1.851
p_mcangle_it	1.415
p_mcbond_it	0.789
p_hb_or_metal_coord	0.227
p_xyhbond_nbd	0.217
p_chiral_restr	0.109

RMS Deviations
Key	Refinement Restraint Deviation
p_multtor_nbd	19.692
p_singtor_nbd	3.898
p_scangle_it	3.165
p_scbond_it	1.983
p_angle_deg	1.851
p_mcangle_it	1.415
p_mcbond_it	0.789
p_hb_or_metal_coord	0.227
p_xyhbond_nbd	0.217
p_chiral_restr	0.109
p_bond_d	0.016
p_plane_restr	0.006

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	3380
Nucleic Acid Atoms
Solvent Atoms	166
Heterogen Atoms	1

Software

Software
Software Name	Purpose
SOLVE	phasing
REFMAC	refinement
DENZO	data reduction
SCALEPACK	data scaling

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.