1BMF | pdb_00001bmf

BOVINE MITOCHONDRIAL F1-ATPASE

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
other		solved by SIRAS model from ARP/wARP

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1		8.2		pH 8.2

Crystal Properties
Matthews coefficient	Solvent content
3.04	54

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 284.22	α = 90
b = 107.76	β = 90
c = 139.68	γ = 90

Symmetry
Space Group	P 21 21 21

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	269	IMAGE PLATE	MARRESEARCH		1993-09-15	M

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	SRS BEAMLINE PX9.6		SRS	PX9.6

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	2.85		97.5	0.098		5.4		96689

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
	2.85		92		0.19		2.9

Refinement

Statistics
Diffraction ID	Structure Solution Method	Starting model	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	Mean Isotropic B
X-RAY DIFFRACTION		CCP4	2.85	6	86186		95		0.17		41.6

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]

RMS Deviations
Key	Refinement Restraint Deviation
p_transverse_tor	31.34
p_staggered_tor	19.92
p_scangle_it	3.42
p_scbond_it	2.16
p_mcangle_it	1.8
p_planar_tor	1.7
p_mcbond_it	1.02
p_multtor_nbd	0.24
p_singtor_nbd	0.21
p_xyhbond_nbd	0.21
p_chiral_restr	0.135
p_planar_d	0.041
p_angle_d	0.03
p_bond_d	0.011
p_plane_restr	0.01
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	22722
Nucleic Acid Atoms
Solvent Atoms	603
Heterogen Atoms	161

Software

Software
Software Name	Purpose
MULTIPLE	model building
PROLSQ	refinement
MOSFLM	data reduction
CCP4	data scaling
MULTIPLE	phasing