1AYF | pdb_00001ayf

BOVINE ADRENODOXIN (OXIDIZED)

X-RAY DIFFRACTION

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Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
1		7.4		PROTEIN WAS CRYSTALLIZED FROM 30% PEG 4000, 10% GLYCEROL, 100 MM TRIS, PH 7.4, 100MM MGCL2, 20 MG/ML PROTEIN

Crystal Properties
Matthews coefficient	Solvent content
2.24	44

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 44.18	α = 90
b = 78.34	β = 90
c = 60.6	γ = 90

Symmetry
Space Group	P 21 21 2

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
1	1	x-ray	123	IMAGE PLATE	MARRESEARCH	TOROIDAL MIRROR	1997-03-31	M

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
1	SYNCHROTRON	EMBL/DESY, HAMBURG BEAMLINE X11		EMBL/DESY, HAMBURG	X11

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Sym I (Observed)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
1	1.75	11	99.9	0.044	30.956	5		21775			19.2

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R-Sym I (Observed)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
1	1.75	1.81	99.1		0.204	7.74	4.5

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (All)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (Observed)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	R-Free Selection Details	Mean Isotropic B
X-RAY DIFFRACTION	MAD	THROUGHOUT	1.85	11	18431	18431	1911	99.9	0.193	0.195	0.19	0.253	0.25	RANDOM	23.6

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]

RMS Deviations
Key	Refinement Restraint Deviation
p_transverse_tor	29.4
p_staggered_tor	19.4
p_planar_tor	4.2
p_scangle_it	4.112
p_scbond_it	2.943
p_mcangle_it	2.814
p_mcbond_it	2.08
p_multtor_nbd	0.262
p_xyhbond_nbd	0.189
p_singtor_nbd	0.185
p_chiral_restr	0.128
p_plane_restr	0.0243
p_angle_d	0.015
p_bond_d	0.012
p_angle_deg
p_planar_d
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	1592
Nucleic Acid Atoms
Solvent Atoms	167
Heterogen Atoms	14

Software

Software
Software Name	Purpose
DM	model building
HEAVY	model building
MLPHARE	phasing
CCP4	refinement
DENZO	data reduction
SCALEPACK	data scaling
DM	phasing
HEAVY	phasing