Annotations: 9X4K

A Local Refined Structure for Sld7 in Complex with Dbf4-bound Mcm6

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth M], D [auth N]	PF18596	Sld7 C-terminal domain (Sld7_C)	Sld7 C-terminal domain	This is an alpha helical domain found at the C-terminal region of Sld7 proteins. Yeast Sld3 and its metazoan counterpart treslin are the hub proteins mediating protein associations critical for formation of the replicative helicase at the replication ...	This is an alpha helical domain found at the C-terminal region of Sld7 proteins. Yeast Sld3 and its metazoan counterpart treslin are the hub proteins mediating protein associations critical for formation of the replicative helicase at the replication origins of chromosomes. Sld7 forms a complex with Sld3 throughout the cell cycle, and associates with and dissociates from origins in an Sld3- dependent manner and is thought to regulate the function of Sld3. Structural analysis of S. cerevisiae Sld7 indicates that two Sld7 molecules form a homodimer using their C-terminal domains [1].	Domain
A [auth 6]	PF00493	MCM P-loop domain (MCM)	MCM P-loop domain		Domain
A [auth 6]	PF14551	MCM N-terminal domain (MCM_N)	MCM N-terminal domain	This family contains the N-terminal domain of MCM proteins.	Domain
A [auth 6]	PF17855	MCM AAA-lid domain (MCM_lid)	MCM AAA-lid domain	This entry represents the AAA-lid domain found in MCM proteins.	Domain
A [auth 6]	PF17207	MCM OB domain (MCM_OB)	MCM OB domain	This family contains an OB-fold found within MCM proteins. This domain contains an insertion at the zinc binding motif [2].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth M], D [auth N]	Mitochondrial morphogenesis protein SLD7	-	regulation of DNA-templated DNA replication initiation DNA-templated DNA replication regulation of biological process regulation of cellular process DNA replication initiation biological regulation primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process DNA replication regulation of DNA-templated DNA replication regulation of DNA-templated DNA replication initiation DNA-templated DNA replication regulation of biological process regulation of cellular process DNA replication initiation biological regulation primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process DNA replication regulation of DNA-templated DNA replication metabolic process cellular process macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of metabolic process regulation of DNA replication regulation of DNA metabolic process	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen cytoskeleton spindle membraneless organelle intracellular membraneless organelle spindle pole microtubule cytoskeleton chromosome, centromeric region chromosome chromosomal region organelle envelope nuclear envelope endomembrane system cytoplasm endoplasmic reticulum
B [auth I]	DDK kinase regulatory subunit DBF4	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding enzyme regulator activity DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding enzyme regulator activity protein serine/threonine kinase activator activity kinase activator activity enzyme activator activity molecular function activator activity molecular function regulator activity protein kinase activator activity protein kinase regulator activity kinase regulator activity	cellular response to stimulus regulation of cellular process regulation of cell cycle phase transition response to stimulus signaling G2/M transition of mitotic cell cycle negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction mitotic cell cycle negative regulation of mitotic cell cycle cell communication mitotic G2/M transition checkpoint regulation of mitotic cell cycle cellular response to stimulus regulation of cellular process regulation of cell cycle phase transition response to stimulus signaling G2/M transition of mitotic cell cycle negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction mitotic cell cycle negative regulation of mitotic cell cycle cell communication mitotic G2/M transition checkpoint regulation of mitotic cell cycle mitotic DNA integrity checkpoint signaling negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction cell cycle DNA replication checkpoint signaling regulation of cell cycle cell cycle process cell cycle G2/M phase transition regulation of biological process mitotic DNA replication checkpoint signaling negative regulation of mitotic cell cycle phase transition regulation of G2/M transition of mitotic cell cycle regulation of cell cycle process biological regulation DNA integrity checkpoint signaling regulation of cell cycle G2/M phase transition negative regulation of cell cycle process cell cycle checkpoint signaling regulation of mitotic cell cycle phase transition mitotic cell cycle checkpoint signaling mitotic cell cycle process negative regulation of cell cycle G2/M phase transition cellular process negative regulation of G2/M transition of mitotic cell cycle mitotic cell cycle phase transition nucleobase-containing compound metabolic process DNA-templated DNA replication DNA replication DNA replication initiation metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication cell cycle DNA replication meiotic cell cycle process premeiotic DNA replication negative regulation of exit from mitosis exit from mitosis cellular component organization cellular component organization or biogenesis mitotic nuclear division organelle fission nuclear division organelle organization regulation of exit from mitosis mitotic DNA replication regulation of DNA-templated DNA replication initiation positive regulation of mitotic cell cycle DNA replication positive regulation of DNA replication regulation of mitotic DNA replication initiation regulation of primary metabolic process positive regulation of metabolic process nuclear cell cycle DNA replication initiation positive regulation of macromolecule metabolic process regulation of nucleobase-containing compound metabolic process regulation of nuclear cell cycle DNA replication positive regulation of DNA metabolic process positive regulation of DNA-templated DNA replication regulation of metabolic process positive regulation of DNA-templated DNA replication initiation regulation of DNA replication regulation of DNA metabolic process cell cycle DNA replication initiation positive regulation of biological process mitotic DNA replication initiation positive regulation of nuclear cell cycle DNA replication positive regulation of cell cycle process positive regulation of mitotic cell cycle positive regulation of DNA replication initiation positive regulation of cellular process regulation of mitotic cell cycle DNA replication regulation of macromolecule metabolic process positive regulation of cell cycle regulation of DNA-templated DNA replication positive regulation of phosphorylation regulation of protein modification process regulation of protein phosphorylation positive regulation of protein metabolic process positive regulation of phosphate metabolic process positive regulation of protein modification process phosphate-containing compound metabolic process protein metabolic process positive regulation of protein phosphorylation protein modification process protein phosphorylation phosphorylation regulation of protein metabolic process macromolecule modification regulation of phosphorylation positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization regulation of reproductive process regulation of meiosis I meiosis I meiotic nuclear division positive regulation of reproductive process regulation of meiotic cell cycle positive regulation of nuclear division positive regulation of meiotic cell cycle regulation of organelle organization regulation of meiotic nuclear division meiosis I cell cycle process positive regulation of meiosis I regulation of nuclear division positive regulation of meiotic nuclear division DNA damage checkpoint signaling cellular response to stress response to stress mitotic DNA damage checkpoint signaling mitotic intra-S DNA damage checkpoint signaling DNA damage response signal transduction in response to DNA damage	intracellular organelle centrosome microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton chromosome, centromeric region chromosome chromosomal region cytoplasm intracellular organelle centrosome microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton chromosome, centromeric region chromosome chromosomal region cytoplasm chromatin membrane-bounded organelle protein-containing complex catalytic complex Dbf4-dependent protein kinase complex nucleus nuclear protein-containing complex intracellular membrane-bounded organelle transferase complex protein kinase complex transferase complex, transferring phosphorus-containing groups serine/threonine protein kinase complex
A [auth 6]	DNA replication licensing factor MCM6	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding double-stranded DNA binding binding nucleic acid binding DNA replication origin binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity nucleic acid conformation isomerase activity isomerase activity DNA helicase activity catalytic activity, acting on a nucleic acid single-stranded DNA helicase activity helicase activity ATP-dependent activity, acting on DNA catalytic activity, acting on DNA macromolecular conformation isomerase activity single-stranded DNA binding	nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA replication initiation sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication nucleobase-containing compound metabolic process DNA replication metabolic process cellular process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA replication initiation sexual reproduction reproductive process meiotic cell cycle nuclear DNA replication cell cycle DNA replication meiotic cell cycle process premeiotic DNA replication cell cycle cell cycle process pre-replicative complex assembly cellular component organization cellular component biogenesis protein-DNA complex organization cellular component assembly protein-containing complex assembly cellular component organization or biogenesis pre-replicative complex assembly involved in nuclear cell cycle DNA replication protein-containing complex organization pre-replicative complex assembly involved in cell cycle DNA replication protein-DNA complex assembly cellular response to stimulus double-strand break repair response to stimulus DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair mitotic DNA replication mitotic cell cycle mitotic cell cycle process DNA strand elongation DNA strand elongation involved in DNA replication	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex nuclear chromosome intracellular membraneless organelle chromosome intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle membraneless organelle CMG complex nuclear lumen MCM core complex cytoplasm MCM complex pre-replicative complex nuclear pre-replicative complex peroxisome microbody nuclear replication fork replication fork

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth M], D [auth N]	IPR016808	Mitochondrial morphogenesis protein Sld7	Family
C [auth M], D [auth N]	IPR041564	Sld7, N-terminal	Domain
C [auth M], D [auth N]	IPR041260	Sld7 C-terminal domain	Domain
B [auth I]	IPR013939	Regulatory subunit Dfp1/Him1, central region	Domain
B [auth I]	IPR006572	Zinc finger, DBF-type	Domain
B [auth I]	IPR038545	DBF-type zinc finger superfamily	Homologous Superfamily
B [auth I]	IPR051590	DDK kinase regulatory subunit Dbf4	Family
B [auth I]	IPR036420	BRCT domain superfamily	Homologous Superfamily
B [auth I]	IPR055116	DBF4, BRCT domain	Domain
A [auth 6]	IPR008049	DNA replication licensing factor Mcm6	Family
A [auth 6]	IPR041024	Mcm6, C-terminal winged-helix domain	Domain
A [auth 6]	IPR031327	Mini-chromosome maintenance protein	Family
A [auth 6]	IPR018525	Mini-chromosome maintenance, conserved site	Conserved Site
A [auth 6]	IPR001208	MCM domain	Domain
A [auth 6]	IPR041562	MCM, AAA-lid domain	Domain
A [auth 6]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth 6]	IPR027925	MCM, N-terminal domain	Domain
A [auth 6]	IPR033762	MCM OB domain	Domain
A [auth 6]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily