Annotations: 9TMK

Structure of CYLD CAP-Gly2 bound to Listeria effector protein InlC

External Resource: Annotation

Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Internalin C	-	-	cellular anatomical structure extracellular region host cellular component host intracellular part host cell cytoplasm host cell part host intracellular region other organism part
B	Ubiquitin carboxyl-terminal hydrolase CYLD	cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein Met1-linked polyubiquitin deubiquitinase activity hydrolase activity catalytic activity deubiquitinase activity K63-linked deubiquitinase activity protein binding binding proline-rich region binding kinase binding cysteine-type peptidase activity ubiquitin-like protein peptidase activity peptidase activity cysteine-type deubiquitinase activity catalytic activity, acting on a protein Met1-linked polyubiquitin deubiquitinase activity hydrolase activity catalytic activity deubiquitinase activity K63-linked deubiquitinase activity protein binding binding proline-rich region binding kinase binding enzyme binding protein kinase binding cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding	multicellular organismal process regulation of cellular process negative regulation of biological process negative regulation of type I interferon production cytokine production negative regulation of cellular process regulation of cytokine production regulation of multicellular organismal process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process type I interferon production negative regulation of metabolic process biological regulation multicellular organismal process regulation of cellular process negative regulation of biological process negative regulation of type I interferon production cytokine production negative regulation of cellular process regulation of cytokine production regulation of multicellular organismal process negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process type I interferon production negative regulation of metabolic process biological regulation negative regulation of cytokine production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process metabolic process cellular process regulation of macromolecule biosynthetic process macromolecule metabolic process negative regulation of multicellular organismal process regulation of metabolic process regulation of type I interferon production regulation of mitotic cell cycle cell cycle regulation of cell cycle mitotic cell cycle cellular response to stimulus response to stimulus signaling regulation of signal transduction regulation of programmed cell death regulation of intrinsic apoptotic signaling pathway intracellular signal transduction cell communication regulation of intracellular signal transduction signal transduction intrinsic apoptotic signaling pathway regulation of signaling regulation of apoptotic process cell death apoptotic signaling pathway regulation of response to stimulus regulation of cell communication apoptotic process programmed cell death regulation of apoptotic signaling pathway negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of p38MAPK cascade p38MAPK cascade negative regulation of cell communication intracellular signaling cassette negative regulation of response to stimulus regulation of MAPK cascade negative regulation of signal transduction regulation of p38MAPK cascade MAPK cascade negative regulation of MAPK cascade negative regulation of canonical NF-kappaB signal transduction canonical NF-kappaB signal transduction regulation of canonical NF-kappaB signal transduction regulation of canonical Wnt signaling pathway canonical Wnt signaling pathway negative regulation of Wnt signaling pathway Wnt signaling pathway cell surface receptor signaling pathway regulation of Wnt signaling pathway negative regulation of canonical Wnt signaling pathway biological process involved in interspecies interaction between organisms immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus regulation of defense response regulation of response to external stimulus negative regulation of inflammatory response regulation of inflammatory response negative regulation of response to external stimulus regulation of response to stress negative regulation of defense response inflammatory response positive regulation of cell communication positive regulation of signal transduction positive regulation of biological process extrinsic apoptotic signaling pathway positive regulation of apoptotic signaling pathway positive regulation of response to stimulus positive regulation of cellular process positive regulation of programmed cell death positive regulation of extrinsic apoptotic signaling pathway positive regulation of apoptotic process regulation of extrinsic apoptotic signaling pathway positive regulation of signaling response to interleukin-18 response to cytokine cytokine-mediated signaling pathway negative regulation of interleukin-18-mediated signaling pathway cellular response to cytokine stimulus cellular response to interleukin-18 regulation of cytokine-mediated signaling pathway response to peptide interleukin-18-mediated signaling pathway regulation of response to cytokine stimulus negative regulation of response to cytokine stimulus negative regulation of cytokine-mediated signaling pathway response to chemical regulation of interleukin-18-mediated signaling pathway protein deubiquitination protein K63-linked deubiquitination primary metabolic process protein modification by small protein removal macromolecule modification protein metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation or removal negative regulation of JNK cascade JNK cascade regulation of JNK cascade regulation of cytoskeleton organization regulation of cellular component organization microtubule cytoskeleton organization regulation of microtubule-based process regulation of organelle organization cellular component organization organelle organization microtubule-based process cellular component organization or biogenesis regulation of microtubule cytoskeleton organization cytoskeleton organization protein linear deubiquitination cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis cellular component assembly cilium assembly cilium organization organelle assembly plasma membrane bounded cell projection organization regulation of cell projection organization regulation of cell projection assembly regulation of cellular component biogenesis regulation of plasma membrane bounded cell projection assembly regulation of cilium assembly regulation of organelle assembly cell projection assembly regulation of plasma membrane bounded cell projection organization necroptotic process programmed necrotic cell death regulation of necroptotic process regulation of programmed necrotic cell death positive regulation of response to biotic stimulus pattern recognition receptor signaling pathway immune response-activating signaling pathway positive regulation of immune response regulation of immune system process positive regulation of immune system process innate immune response-activating signaling pathway regulation of innate immune response positive regulation of defense response activation of innate immune response regulation of immune response activation of immune response cytoplasmic pattern recognition receptor signaling pathway regulation of response to biotic stimulus intracellular receptor signaling pathway positive regulation of response to external stimulus immune response-regulating signaling pathway nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway positive regulation of innate immune response regulation of non-canonical NF-kappaB signal transduction negative regulation of non-canonical NF-kappaB signal transduction non-canonical NF-kappaB signal transduction cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway regulation of tumor necrosis factor-mediated signaling pathway response to tumor necrosis factor	intracellular organelle centrosome microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton centriolar satellite cytoplasm cytosol membrane-bounded organelle intracellular organelle centrosome microtubule organizing center cellular anatomical structure intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle microtubule cytoskeleton centriolar satellite cytoplasm cytosol membrane-bounded organelle cell projection ciliary tip cilium plasma membrane bounded cell projection cell periphery plasma membrane membrane perinuclear region of cytoplasm spindle ciliary basal body

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR025875	Leucine rich repeat 4	Repeat
A	IPR032675	Leucine-rich repeat domain superfamily	Homologous Superfamily
A	IPR014756	Immunoglobulin E-set	Homologous Superfamily
A	IPR001611	Leucine-rich repeat	Repeat
A	IPR014755	Copper resistance protein CopC/internalin, immunoglobulin-like	Homologous Superfamily
A	IPR012569	Internalin, Ig-like inter-repeat region	Domain
A	IPR050836	SDS22/Internalin LRR-containing	Family
A	IPR024634	Internalin, N-terminal	Domain
A	IPR003591	Leucine-rich repeat, typical subtype	Repeat
B	IPR061979	CYLD, SH3 domain	Domain
B	IPR018200	Ubiquitin specific protease, conserved site	Conserved Site
B	IPR000938	CAP Gly-rich domain	Domain
B	IPR038765	Papain-like cysteine peptidase superfamily	Homologous Superfamily
B	IPR036859	CAP Gly-rich domain superfamily	Homologous Superfamily
B	IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	Domain
B	IPR028889	Ubiquitin specific protease USP, catalytic domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	: Q9NQC7	Brooke-Spiegler syndrome thymoma listeriosis non-small cell lung carcinoma familial cylindromatosis amyotrophic lateral sclerosis trichoepithelioma, multiple familial, 1 thymic carcinoma hepatocellular carcinoma large cell medulloblastoma Liver carcinoma malignant glioma myopathy oligodendroglioma breast cancer Brooke-Spiegler syndrome thymoma listeriosis non-small cell lung carcinoma familial cylindromatosis amyotrophic lateral sclerosis trichoepithelioma, multiple familial, 1 thymic carcinoma hepatocellular carcinoma large cell medulloblastoma Liver carcinoma malignant glioma myopathy oligodendroglioma breast cancer Pick disease cervical cancer rheumatoid arthritis dermatomyositis ulcerative colitis familial multiple trichoepithelioma head and neck carcinoma inflammatory bowel disease leprosy lung cancer malignant mesothelioma neurodegenerative disease osteosarcoma primitive neuroectodermal tumor Sjogren syndrome Crohn disease glioblastoma head and neck neoplasm juvenile dermatomyositis malignant ependymoma medulloblastoma atypical teratoid rhabdoid tumor ovarian cancer cancer psoriasis cutaneous lupus erythematosus tuberculosis head and neck cancer