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 9R2Y | pdb_00009r2y

Drosophila MSL HAT nucleosome complex H4K16ac postcatalytic H3K36me3 reader state


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
M [auth O]SCOP2B SuperfamilyChromo domain-like 8038630 3000161 SCOP2B (2022-06-29)
L [auth N]SCOP2B SuperfamilyChromo domain-like 8098726 3000161 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyCore histone-like 8066267 3001387 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCore histone-like 8066267 3001387 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCore histone-like 8067138 3001387 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCore histone-like 8067138 3001387 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCore histone-like 8070545 3001387 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyCore histone-like 8039340 3001387 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyCore histone-like 8039340 3001387 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
M [auth O]PF17772MYST family zinc finger domain (zf-MYST)MYST family zinc finger domainThis zinc finger domain is found in the MYST family of histone acetyltransferases [1]. Domain
M [auth O]PF11717RNA binding activity-knot of a chromodomain (Tudor-knot)RNA binding activity-knot of a chromodomain- Family
M [auth O]PF01853MOZ/SAS family (MOZ_SAS)MOZ/SAS familyThis region of these proteins has been suggested to be homologous to acetyltransferases [1]. Domain
L [auth N]PF22732MSL3 chromodomain-like (MSL3_chromo-like)MSL3 chromodomain-likeThis domain is found in Male-specific lethal-3 (MSL3) and other related proteins such as MRG15 transcription factor. MSL3 resides in the MSL (male-specific lethal) complex, which upregulates transcription by spreading the histone H4 Lys16 acetyl mark ...This domain is found in Male-specific lethal-3 (MSL3) and other related proteins such as MRG15 transcription factor. MSL3 resides in the MSL (male-specific lethal) complex, which upregulates transcription by spreading the histone H4 Lys16 acetyl mark. The MSL3 chromo domain implicated in chromatin targeting and its deletion leads to the disruption of MSL targeting. The MRG15 chromo domain is involved in chromatin remodelling and transcription regulation. This domain consists of a SH3-like beta-barrel and a long alpha-helix.
Domain
K [auth M]PF15275PEHE domain (PEHE)PEHE domain- Family
C, G
PF16211C-terminus of histone H2A (Histone_H2A_C)C-terminus of histone H2A- Family
B, F
PF15511Centromere kinetochore component CENP-T histone fold (CENP-T_C)Centromere kinetochore component CENP-T histone foldCENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].
Domain
A, E
PF00125Core histone H2A/H2B/H3/H4 domain (Histone)Core histone H2A/H2B/H3/H4 domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
M [auth O]Histone acetyltransferase MOF
L [auth N]Protein male-specific lethal-3
K [auth M]Protein male-specific lethal-1
DNA---
DNA---
D, H
Histone H2B type 1-C/E/F/G/I
C, G
Histone H2A type 1-C
B, F
Histone H4
A, E
Histone H3.1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
M [auth O]IPR002717Histone acetyltransferase domain, MYST-typeDomain
M [auth O]IPR016197Chromo-like domain superfamilyHomologous Superfamily
M [auth O]IPR050603MYST family histone acetyltransferasesFamily
M [auth O]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
M [auth O]IPR025995RNA binding activity-knot of a chromodomainDomain
M [auth O]IPR016181Acyl-CoA N-acyltransferaseHomologous Superfamily
M [auth O]IPR040706MYST, zinc finger domainDomain
L [auth N]IPR016197Chromo-like domain superfamilyHomologous Superfamily
L [auth N]IPR008676MRGFamily
L [auth N]IPR038217MRG, C-terminal domain superfamilyHomologous Superfamily
L [auth N]IPR053820MSL3 chromodomain-likeDomain
L [auth N]IPR026541MRG domainDomain
K [auth M]IPR026711Protein male-specific lethal-1Family
K [auth M]IPR029332PEHE domainDomain
D, H
IPR009072Histone-foldHomologous Superfamily
D, H
IPR000558Histone H2BFamily
D, H
IPR007125Core Histone H2A/H2B/H3 domainDomain
D, H
IPR055333Histone H2B, conserved siteConserved Site
C, G
IPR009072Histone-foldHomologous Superfamily
C, G
IPR002119Histone H2AFamily
C, G
IPR007125Core Histone H2A/H2B/H3 domainDomain
C, G
IPR061508Histone H2A, histone foldDomain
C, G
IPR032454Histone H2A, C-terminal domainDomain
C, G
IPR032458Histone H2A conserved siteConserved Site
B, F
IPR009072Histone-foldHomologous Superfamily
B, F
IPR035425CENP-T/Histone H4, histone foldDomain
B, F
IPR001951Histone H4Family
B, F
IPR019809Histone H4, conserved siteConserved Site
B, F
IPR004823TATA box binding protein associated factor (TAF), histone-like fold domainDomain
A, E
IPR009072Histone-foldHomologous Superfamily
A, E
IPR007125Core Histone H2A/H2B/H3 domainDomain
A, E
IPR000164Histone H3/CENP-AFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
D, H
:  P62807
C, G
:  Q93077
B, F
:  P62805
A, E
:  P68431

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
M [auth O]ALY Parent Component: LYS

:  AA0055

:  N6-acetyl-L-lysine MOD:00064
B, F
ALY Parent Component: LYS

:  AA0055 , AA0055

:  N6-acetyl-L-lysine MOD:00064 , N6-acetyl-L-lysine MOD:00064
A, E
M3L Parent Component: LYS

:  AA0055 , AA0055 , AA0074

:  N6-acetyl-L-lysine MOD:00064 , N6-acetyl-L-lysine MOD:00064 , N6,N6,N6-trimethyl-L-lysine MOD:00083