9M0Y | pdb_00009m0y

Local refinement of stacked like DDB1-DDA1-DET1-Ube2e2-COP1 complex (layer 2)


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
K [auth S],
N [auth V]
PF10433RSE1/DDB1/CPSF1 first beta-propeller (Beta-prop_RSE1_1st)RSE1/DDB1/CPSF1 first beta-propeller- Repeat
K [auth S],
N [auth V]
PF03178CPSF A subunit region (CPSF_A)CPSF A subunit region- Repeat
J [auth R],
M [auth U]
PF09737De-etiolated protein 1 Det1 (Det1)De-etiolated protein 1 Det1- Family
I [auth Q],
L [auth T]
PF00179Ubiquitin-conjugating enzyme (UQ_con)Ubiquitin-conjugating enzymeProteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].
Domain
A,
B,
C,
D,
E,
PF13923Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_2)Zinc finger, C3HC4 type (RING finger)Domain
A,
B,
C,
D,
E,
PF10172Det1 complexing ubiquitin ligase (DDA1)Det1 complexing ubiquitin ligase- Family
A,
B,
C,
D,
E,
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
O [auth j],
P [auth n]
DET1- and DDB1-associated protein 1-
K [auth S],
N [auth V]
DNA damage-binding protein 1
J [auth R],
M [auth U]
DET1 homolog
I [auth Q],
L [auth T]
Ubiquitin-conjugating enzyme E2 E2
A,
B,
C,
D,
E,
E3 ubiquitin-protein ligase COP1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
O [auth j],
P [auth n]
IPR018276DET1- and DDB1-associated protein 1 domainDomain
O [auth j],
P [auth n]
IPR033575DET1- and DDB1-associated protein 1-likeFamily
K [auth S],
N [auth V]
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
K [auth S],
N [auth V]
IPR058543RSE1/DDB1/CPSF1, second beta-propellerDomain
K [auth S],
N [auth V]
IPR004871RSE1/DDB1/CPSF1, C-terminalDomain
K [auth S],
N [auth V]
IPR050358RSE1/DDB1/CPSF1Family
K [auth S],
N [auth V]
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
K [auth S],
N [auth V]
IPR018846RSE1/DDB1/CPSF1, first beta-propellerDomain
J [auth R],
M [auth U]
IPR019138De-etiolated protein 1, Det1Family
I [auth Q],
L [auth T]
IPR016135Ubiquitin-conjugating enzyme/RWD-likeHomologous Superfamily
I [auth Q],
L [auth T]
IPR000608Ubiquitin-conjugating (UBC), catalytic core domainDomain
I [auth Q],
L [auth T]
IPR023313Ubiquitin-conjugating enzyme, active siteActive Site
A,
B,
C,
D,
E,
IPR017907Zinc finger, RING-type, conserved siteConserved Site
A,
B,
C,
D,
E,
IPR019775WD40 repeat, conserved siteConserved Site
A,
B,
C,
D,
E,
IPR013083Zinc finger, RING/FYVE/PHD-typeHomologous Superfamily
A,
B,
C,
D,
E,
IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
A,
B,
C,
D,
E,
IPR042755E3 ubiquitin-protein ligase COP1Family
A,
B,
C,
D,
E,
IPR001680WD40 repeatRepeat
A,
B,
C,
D,
E,
IPR001841Zinc finger, RING-typeDomain
A,
B,
C,
D,
E,
IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
O [auth j],
P [auth n]
PharosQ9BW61
K [auth S],
N [auth V]
PharosQ16531
J [auth R],
M [auth U]
PharosQ7L5Y6
I [auth Q],
L [auth T]
PharosQ96LR5
A,
B,
C,
D,
E,
PharosQ8NHY2