QDE-1 in complex with DNA template, RNA primer and AMPNPP
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | Two-barrel nucleic acid polymerases | 8055682 | 3001330 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Two-barrel nucleic acid polymerases | 8055683 | 3001330 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Two-barrel nucleic acid polymerases | 8055682 | 3001330 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Two-barrel nucleic acid polymerases | 8055683 | 3001330 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | RdRP_3rd | e7y7sB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: RdRP_3rd | ECOD (1.6) |
| B | RdRP_2nd | e7y7sB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: RdRP_2nd | ECOD (1.6) |
| B | RdRP_4th | e7y7sB3 | A: alpha complex topology | X: RNAi polymerase helical domain (From Topology) | H: RNAi polymerase helical domain (From Topology) | T: RNAi polymerase helical domain | F: RdRP_4th | ECOD (1.6) |
| B | RdRP_1st | e7y7sB4 | A: a+b complex topology | X: RNAi polymerase N-terminal domain (From Topology) | H: RNAi polymerase N-terminal domain (From Topology) | T: RNAi polymerase N-terminal domain | F: RdRP_1st | ECOD (1.6) |
| A | RdRP_3rd | e7y7sA3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: RdRP_3rd | ECOD (1.6) |
| A | RdRP_2nd | e7y7sA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: double psi | F: RdRP_2nd | ECOD (1.6) |
| A | RdRP_4th | e7y7sA2 | A: alpha complex topology | X: RNAi polymerase helical domain (From Topology) | H: RNAi polymerase helical domain (From Topology) | T: RNAi polymerase helical domain | F: RdRP_4th | ECOD (1.6) |
| A | RdRP_1st | e7y7sA4 | A: a+b complex topology | X: RNAi polymerase N-terminal domain (From Topology) | H: RNAi polymerase N-terminal domain (From Topology) | T: RNAi polymerase N-terminal domain | F: RdRP_1st | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF05183 | RNA dependent RNA polymerase (RdRP) | RNA dependent RNA polymerase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR057596 | RDRP, core domain | Domain | |
| IPR007855 | RNA-dependent RNA polymerase | Family |














