X-ray structure of the VioB N-aetyltransferase from Acinetobacter baumannii in the presence of a reaction intermediate
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Hexapep_2_1 | e7txsA2 | A: beta duplicates or obligate multimers | X: Single-stranded left-handed beta-helix | H: Trimeric LpxA-like enzymes (From Topology) | T: Trimeric LpxA-like enzymes | F: Hexapep_2_1 | ECOD (1.6) |
| A | NeuD_NnaD | e7txsA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: MurCD/PglD N-terminal domain-like | F: NeuD_NnaD | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00132 | Bacterial transferase hexapeptide (six repeats) (Hexapep) | Bacterial transferase hexapeptide (six repeats) | - | Repeat | |
| PF17836 | PglD N-terminal domain (PglD_N) | PglD N-terminal domain | This alpha/beta domain is found at the N-terminus of proteins such as PglD [2]. This domain binds a UDP-sugar substrate [3]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| VioB | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily | |
| IPR041561 | PglD, N-terminal | Domain | |
| IPR018357 | Hexapeptide transferase, conserved site | Conserved Site | |
| IPR050179 | Transferase hexapeptide repeat | Family | |
| IPR020019 | Acyltransferase PglD-like | Family | |
| IPR001451 | Hexapeptide repeat | Repeat |
