7JI0 | pdb_00007ji0

CryoEM structure of Streptococcus thermophilus SHP pheromone receptor Rgg3 in complex with SHP3

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AV-sete7ji0A1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (v294.1)
BV-sete7ji0B1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21259HTH-type transcriptional regulator Rgg, C-terminal domain (Rgg_C)HTH-type transcriptional regulator Rgg, C-terminal domain- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
SHP3---
A, B
Positive transcriptional regulator MutR family - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR053163HTH-type transcriptional regulator Rgg-likeFamily
A, B
IPR010057HTH-type transcriptional regulator Rgg, C-terminal domainDomain
A, B
IPR001387Cro/C1-type, helix-turn-helix domainDomain
A, B
IPR011990Tetratricopeptide-like helical domain superfamilyHomologous Superfamily
A, B
IPR010982Lambda repressor-like, DNA-binding domain superfamilyHomologous Superfamily