Crystal structure of Streptococcus thermophilus SHP pheromone receptor Rgg3 bound to DNA
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | FHIPEP | e6w1fA1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FHIPEP | ECOD (v294.1) |
| B | FHIPEP | e6w1fB1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: FHIPEP | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF21259 | HTH-type transcriptional regulator Rgg, C-terminal domain (Rgg_C) | HTH-type transcriptional regulator Rgg, C-terminal domain | - | Repeat |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| D [auth F] | DNA (30-MER) | - | - | - |
| C [auth E] | DNA (30-MER) | - | - | - |
| Positive transcriptional regulator MutR family | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR053163 | HTH-type transcriptional regulator Rgg-like | Family | |
| IPR010057 | HTH-type transcriptional regulator Rgg, C-terminal domain | Domain | |
| IPR001387 | Cro/C1-type, helix-turn-helix domain | Domain | |
| IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
| IPR010982 | Lambda repressor-like, DNA-binding domain superfamily | Homologous Superfamily |
