Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, ATP-bound
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | d4ej7c_ | Alpha and beta proteins (a+b) | Protein kinase-like (PK-like) | Protein kinase-like (PK-like) | automated matches | automated matches | (Acinetobacter baumannii AYE ) [TaxId: 509173 ], | SCOPe (2.08) |
| B | d4ej7b_ | Alpha and beta proteins (a+b) | Protein kinase-like (PK-like) | Protein kinase-like (PK-like) | automated matches | automated matches | (Acinetobacter baumannii AYE ) [TaxId: 509173 ], | SCOPe (2.08) |
| A | d4ej7a_ | Alpha and beta proteins (a+b) | Protein kinase-like (PK-like) | Protein kinase-like (PK-like) | automated matches | automated matches | (Acinetobacter baumannii AYE ) [TaxId: 509173 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | RRM_1 | e4ej7C1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: RRM_1 | ECOD (v294.1) |
| B | A2M_BRD | e4ej7B1 | A: a/b three-layered sandwiches | X: Transmembrane heme-binding four-helical bundle | H: Anticodon-binding domain of Class II aaRS | T: Anticodon-binding domain of Class II aaRS | F: A2M_BRD | ECOD (v294.1) |
| A | APH | e4ej7A1 | A: a/b three-layered sandwiches | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: APH | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.30.200.20 | Alpha Beta | 2-Layer Sandwich | Phosphorylase Kinase | domain 1 | CATH (4.3.0) |
| C | 3.90.1200.10 | Alpha Beta | Alpha-Beta Complex | Aminoglycoside 3'-phosphotransferase | Chain: A, domain 2 | CATH (4.3.0) |
| B | 3.30.200.20 | Alpha Beta | 2-Layer Sandwich | Phosphorylase Kinase | domain 1 | CATH (4.3.0) |
| B | 3.90.1200.10 | Alpha Beta | Alpha-Beta Complex | Aminoglycoside 3'-phosphotransferase | Chain: A, domain 2 | CATH (4.3.0) |
| A | 3.30.200.20 | Alpha Beta | 2-Layer Sandwich | Phosphorylase Kinase | domain 1 | CATH (4.3.0) |
| A | 3.90.1200.10 | Alpha Beta | Alpha-Beta Complex | Aminoglycoside 3'-phosphotransferase | Chain: A, domain 2 | CATH (4.3.0) |
AMR Gene: CARD Annotation CARD Database Homepage
| Chains | Accession | Short Name | Description | Provenance Source (Version) |
|---|---|---|---|---|
| ARO:3002641 | APH(3')-Ia | APH(3')-Ia is a transposon-encoded aminoglycoside phosphotransferase in E. coli and S. enterica. It is identical at the protein sequence to APH(3')-Ic, an aminoglycoside phosphotransferase encoded by plasmids, transposons and genomic islands in K. pneumoniae, A. baumannii, S. marcescens, Corynebacterium spp., Photobacterium spp. and Citrobacter spp. | CARD (4.0.1) |
AMR Gene Family: CARD Annotation CARD Database Homepage
| Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
|---|---|---|---|---|---|
| ARO:3000126 | APH(3') | aminoglycoside antibiotic | antibiotic inactivation | CARD (4.0.1) |
