Structure-Activity Relationship of an All-alpha-helical Prenyltransferase Reveals the Mechanism of Indole Prenylation.
Oshiro, T., Uehara, S., Suto, A., Tanaka, Y., Ito, T., Kodera, Y., Matsui, T.(2025) Biochemistry 
- PubMed: 40968638 
- DOI: https://doi.org/10.1021/acs.biochem.5c00329
- Primary Citation of Related Structures:  
9V4G, 9V4H, 9V4I, 9V4J - PubMed Abstract: 
Enzymes are involved in the biosynthesis of a variety of secondary metabolites found in nature. The catalytic mechanism is regulated by the three-dimensional structure of the enzyme, particularly at the catalytic site, resulting in the synthesis of natural products with complex conformations derived from a regioselective, chemoselective, or stereoselective preference of the enzyme reaction. Prenyltransferase, which belongs to the prenylsynthase superfamily, catalyzes the condensation of isoprene to an aromatic compound, consequently producing a terpenoid scaffold structure. Prenyltransferase thus plays an important role in expanding the chemical diversity of the terpenoids. Although the three-dimensional structures of prenylsynthases categorized in the same superfamily have been resolved, the catalytic mechanism of prenyltransferase has been veiled. In this study, we determined the X-ray crystal structure of a novel prenyltransferase, Ord1, which is derived from Streptomyces . Here, we report the enzymatic characteristics of the Ord1 and discuss its catalytic mechanism.
- Department of Physics, School of Science, Kitasato University, Sagamihara, Kanagawa 252-0373, Japan.
Organizational Affiliation: