PRD_900099

METHYL 2-THIO-BETA-SOPHOROSIDE

Created:	2020-05-08
Last modified:	2020-07-29

PRD_900099 is described in the Biologically Interesting Molecule Reference Dictionary (BIRD).

The representative PDB ID is 6MD6.

Find Related PDB Entries
6 entries where PRD_900099 is present

Chemical Details
Formal Charge	0
Atom Count	48
Chiral Atom Count	10
Bond Count	49
Aromatic Bond Count	0

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	METHYL 2-THIO-BETA-SOPHOROSIDE
Systematic Name (OpenEye OEToolkits)	(2~{R},3~{S},4~{S},5~{R},6~{S})-2-(hydroxymethyl)-6-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-2-methoxy-4,5-bi s(oxidanyl)oxan-3-yl]sulfanyl-oxane-3,4,5-triol
Formula	C₁₃ H₂₄ O₁₀ S
Molecular Weight	372.389
Type	SACCHARIDE

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	OC1C(OC(C(C1O)O)CO)SC2C(O)C(O)C(OC2OC)CO
SMILES	CACTVS	3.385	CO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1S[CH]2O[CH](CO)[CH](O)[CH](O)[CH]2O
SMILES	OpenEye OEToolkits	2.0.7	COC1C(C(C(C(O1)CO)O)O)SC2C(C(C(C(O2)CO)O)O)O
Canonical SMILES	CACTVS	3.385	CO[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1S[C@@H]2O[C@H](CO)[C@@H](O)[C@H](O)[C@H]2O
Canonical SMILES	OpenEye OEToolkits	2.0.7	CO[C@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)S[C@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O)O)O
InChI	InChI	1.03	InChI=1S/C13H24O10S/c1-21-12-11(9(19)7(17)4(2-14)22-12)24-13-10(20)8(18)6(16)5(3-15)23-13/h4-20H,2-3H2,1H3/t4-,5-,6-,7- ,8+,9+,10-,11-,12-,13+/m1/s1
InChIKey	InChI	1.03	WAYOKHSZGNFKSX-VHGSIDFWSA-N

Related Resource References

Resource Name	Reference
PubChem	138393367

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.