D06

(2S)-2-amino-1-(1,3-dihydro-2H-isoindol-2-yl)-2-[(1r,4S)-4-(pyrrolidin-1-yl)cyclohexyl]ethan-1-one

Created:	2021-11-23
Last modified:	2022-10-05

Find Related PDB Entry
2 entries where D06 is found as a standalone ligand

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	53
Chiral Atom Count	1
Bond Count	56
Aromatic Bond Count	6

2D diagram of D06

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	(2S)-2-amino-1-(1,3-dihydro-2H-isoindol-2-yl)-2-[(1r,4S)-4-(pyrrolidin-1-yl)cyclohexyl]ethan-1-one
Systematic Name (OpenEye OEToolkits)	(2~{S})-2-azanyl-1-(1,3-dihydroisoindol-2-yl)-2-(4-pyrrolidin-1-ylcyclohexyl)ethanone
Formula	C₂₀ H₂₉ N₃ O
Molecular Weight	327.464
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	O=C(N1Cc2ccccc2C1)C(N)C1CCC(CC1)N1CCCC1
SMILES	CACTVS	3.385	N[CH]([CH]1CC[CH](CC1)N2CCCC2)C(=O)N3Cc4ccccc4C3
SMILES	OpenEye OEToolkits	2.0.7	c1ccc2c(c1)CN(C2)C(=O)C(C3CCC(CC3)N4CCCC4)N
Canonical SMILES	CACTVS	3.385	N[C@@H]([C@@H]1CC[C@H](CC1)N2CCCC2)C(=O)N3Cc4ccccc4C3
Canonical SMILES	OpenEye OEToolkits	2.0.7	c1ccc2c(c1)CN(C2)C(=O)[C@H](C3CCC(CC3)N4CCCC4)N
InChI	InChI	1.03	InChI=1S/C20H29N3O/c21-19(15-7-9-18(10-8-15)22-11-3-4-12-22)20(24)23-13-16-5-1-2-6-17(16)14-23/h1-2,5-6,15,18-19H,3-4,7-14,21H2/t15-,18-,19-/m0/s1
InChIKey	InChI	1.03	SYXDQNGJEXFDND-SNRMKQJTSA-N

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.