A1IXI

9-deazaguanosine-5'-monophosphate

Created:	2024-12-19
Last modified:	2025-11-12

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1 entries where A1IXI is found as a standalone ligand

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Chemical Details
Formal Charge	0
Atom Count	39
Chiral Atom Count	4
Bond Count	41
Aromatic Bond Count	10

2D diagram of A1IXI

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Chemical Component Summary
Name	9-deazaguanosine-5'-monophosphate
Synonyms	[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-4-oxidanyl-5~{H}-pyrrolo[3,2-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
Systematic Name (OpenEye OEToolkits)	[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-4-oxidanyl-5~{H}-pyrrolo[3,2-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl dihydrogen phosphate
Formula	C₁₁ H₁₅ N₄ O₈ P
Molecular Weight	362.233
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	CACTVS	3.385	Nc1nc(O)c2[nH]cc([CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O)c2n1
SMILES	OpenEye OEToolkits	2.0.7	c1c(c2c([nH]1)c(nc(n2)N)O)C3C(C(C(O3)COP(=O)(O)O)O)O
Canonical SMILES	CACTVS	3.385	Nc1nc(O)c2[nH]cc([C@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O)c2n1
Canonical SMILES	OpenEye OEToolkits	2.0.7	c1c(c2c([nH]1)c(nc(n2)N)O)[C@@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O
InChI	InChI	1.06	InChI=1S/C11H15N4O8P/c12-11-14-5-3(1-13-6(5)10(18)15-11)9-8(17)7(16)4(23-9)2-22-24(19,20)21/h1,4,7-9,13,16-17H,2H2,(H2,19,20,21)(H3,12,14,15,18)/t4-,7-,8-,9-/m1/s1
InChIKey	InChI	1.06	OHDNVDXQRZLJEP-XCBZGROMSA-N

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.