5NB

5'-amino-8-bromo-5'-deoxyadenosine

Created:	2012-01-06
Last modified:	2012-01-06

Find Related PDB Entry
2 entries where 5NB is found as a standalone ligand

Find related ligands:

Similar Ligands (Stereospecific) Similar Ligands (including Stereoisomers) Similar Ligands (Quick Screen) Similar Ligands (Substructure Stereospecific) Similar Ligands (Substructure including Stereoisomers)

Chemical Details
Formal Charge	0
Atom Count	33
Chiral Atom Count	4
Bond Count	35
Aromatic Bond Count	10

2D diagram of 5NB

Toggle Hydrogen Toggle Labels

Chemical Component Summary
Name	5'-amino-8-bromo-5'-deoxyadenosine
Systematic Name (OpenEye OEToolkits)	(2R,3S,4R,5R)-2-(aminomethyl)-5-(6-azanyl-8-bromanyl-purin-9-yl)oxolane-3,4-diol
Formula	C₁₀ H₁₃ Br N₆ O₃
Molecular Weight	345.153
Type	NON-POLYMER

Chemical Descriptors
Type	Program	Version	Descriptor
SMILES	ACDLabs	12.01	Brc2nc1c(ncnc1n2C3OC(C(O)C3O)CN)N
SMILES	CACTVS	3.370	NC[CH]1O[CH]([CH](O)[CH]1O)n2c(Br)nc3c(N)ncnc23
SMILES	OpenEye OEToolkits	1.7.6	c1nc(c2c(n1)n(c(n2)Br)C3C(C(C(O3)CN)O)O)N
Canonical SMILES	CACTVS	3.370	NC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2c(Br)nc3c(N)ncnc23
Canonical SMILES	OpenEye OEToolkits	1.7.6	c1nc(c2c(n1)n(c(n2)Br)[C@H]3[C@@H]([C@@H]([C@H](O3)CN)O)O)N
InChI	InChI	1.03	InChI=1S/C10H13BrN6O3/c11-10-16-4-7(13)14-2-15-8(4)17(10)9-6(19)5(18)3(1-12)20-9/h2-3,5-6,9,18-19H,1,12H2,(H2,13,14,15)/t3-,5-,6-,9-/m1/s1
InChIKey	InChI	1.03	WSWAKFOKHOTDLO-UUOKFMHZSA-N

Related Resource References

Resource Name	Reference
PubChem	56835776

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.