PDA: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-AMINO]-PROPIONIC ACID
PDA is a Ligand Of Interest in 5XT6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5XT6_PDA_B_501 | 34% | 10% | 0.246 | 0.931 | 3.09 | 1.31 | 3 | 5 | 3 | 0 | 100% | 1 |
| 5XT6_PDA_A_501 | 31% | 8% | 0.248 | 0.918 | 2.96 | 1.63 | 3 | 7 | 5 | 0 | 100% | 1 |
| 5ZSK_PDA_A_501 | 29% | 34% | 0.271 | 0.934 | 1.38 | 1.23 | 3 | 2 | 6 | 0 | 100% | 1 |
| 8H21_PDA_A_407 | 87% | 12% | 0.093 | 0.966 | 2.19 | 1.89 | 3 | 3 | 1 | 0 | 100% | 1 |
| 5G2Q_PDA_H_1000 | 74% | 11% | 0.14 | 0.972 | 2.56 | 1.68 | 2 | 4 | 0 | 0 | 100% | 1 |
| 1ELU_PDA_A_400 | 72% | 1% | 0.122 | 0.946 | 4.9 | 2.99 | 11 | 12 | 6 | 1 | 100% | 1 |
| 2Q3D_PDA_A_311 | 68% | 20% | 0.17 | 0.982 | 1.73 | 1.64 | 3 | 3 | 3 | 1 | 100% | 1 |
| 6KG1_PDA_A_503 | 42% | 2% | 0.251 | 0.971 | 3.64 | 2.91 | 6 | 9 | 8 | 0 | 100% | 1 |
