Ligand validation:5MI9

GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 5MI9 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5MI9_GDP_B_402	51%	63%	0.181	0.935	0.67	0.73	1	-	0	0	100%	1
5MI9_GDP_A_402	43%	54%	0.201	0.927	0.84	0.94	1	1	2	0	100%	1
3U6B_GDP_A_402	91%	61%	0.101	0.987	0.9	0.62	1	-	0	0	100%	1
2HCJ_GDP_A_999	88%	53%	0.106	0.982	0.94	0.88	2	3	0	0	100%	1
5MI8_GDP_A_403	86%	55%	0.084	0.951	0.85	0.87	2	2	0	0	100%	1
5MI3_GDP_B_402	83%	44%	0.123	0.982	1.01	1.14	2	3	0	0	100%	1
4PC2_GDP_B_401	83%	58%	0.115	0.973	0.7	0.91	-	-	0	0	100%	1
9C3Z_GDP_B_202	100%	29%	0.018	0.997	1.51	1.32	3	6	0	0	100%	1
9C3N_GDP_B_202	100%	42%	0.02	0.997	1.26	1	1	1	0	0	100%	1
9C3L_GDP_A_201	100%	49%	0.021	0.997	0.91	1.04	1	1	0	0	100%	1
9C3K_GDP_B_201	100%	40%	0.014	0.998	1.15	1.18	1	3	0	0	100%	1
9BL0_GDP_B_201	100%	55%	0.018	0.998	1.08	0.69	3	1	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.