MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
MGD is a Ligand Of Interest in 4YDD designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4YDD_MGD_A_1003 | 61% | 1% | 0.169 | 0.957 | 5.26 | 2.28 | 27 | 9 | 0 | 0 | 100% | 1 |
| 4YDD_MGD_E_1003 | 48% | 1% | 0.193 | 0.937 | 5.46 | 2.11 | 26 | 13 | 1 | 0 | 100% | 1 |
| 4YDD_MGD_C_1003 | 40% | 1% | 0.227 | 0.94 | 5.5 | 2.28 | 26 | 9 | 1 | 0 | 100% | 1 |
| 5E7O_MGD_C_1003 | 81% | 1% | 0.112 | 0.964 | 6.16 | 1.88 | 29 | 12 | 1 | 0 | 100% | 1 |
| 5CH7_MGD_A_1003 | 64% | 1% | 0.173 | 0.973 | 5.66 | 3 | 25 | 14 | 2 | 0 | 100% | 1 |
| 5CHC_MGD_A_1003 | 60% | 1% | 0.191 | 0.977 | 5.78 | 2.68 | 28 | 13 | 1 | 0 | 100% | 1 |
| 8R3A_MGD_A_912 | 100% | 44% | 0.026 | 0.994 | 1.1 | 1.06 | 5 | 4 | 2 | 0 | 100% | 1 |
| 1G8K_MGD_E_5201 | 100% | 27% | 0.03 | 0.991 | 1.49 | 1.47 | 7 | 4 | 2 | 0 | 100% | 1 |
| 2E7Z_MGD_A_801 | 100% | 28% | 0.032 | 0.992 | 1.32 | 1.57 | 2 | 8 | 1 | 0 | 100% | 1 |
| 3O5A_MGD_A_1804 | 100% | 23% | 0.049 | 0.99 | 1.22 | 1.96 | 3 | 14 | 2 | 0 | 100% | 1 |
| 5T5I_MGD_J_503 | 100% | 36% | 0.043 | 0.983 | 1.21 | 1.32 | 3 | 3 | 1 | 0 | 100% | 1 |
