GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3LO5 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3LO5_GDP_C_180 | 80% | 44% | 0.127 | 0.976 | 0.96 | 1.2 | 1 | 4 | 1 | 0 | 100% | 1 |
| 3LO5_GDP_A_180 | 77% | 45% | 0.128 | 0.969 | 0.97 | 1.14 | 1 | 3 | 0 | 0 | 100% | 1 |
| 3LO5_GDP_E_180 | 75% | 43% | 0.143 | 0.977 | 0.91 | 1.27 | 1 | 4 | 0 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
| 9BAI_GDP_C_203 | 100% | 33% | 0.034 | 0.991 | 1.16 | 1.47 | 1 | 5 | 1 | 0 | 100% | 1 |
| 4LUC_GDP_A_204 | 100% | 40% | 0.036 | 0.992 | 1.22 | 1.11 | 2 | 2 | 0 | 0 | 100% | 1 |
| 9BAK_GDP_B_202 | 100% | 43% | 0.033 | 0.989 | 1.06 | 1.16 | 2 | 2 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 17% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
