Relaxation-based Refined Structure Of Chlamydomonas Outer Arm Dynein Light Chain 1
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | R1 relaxation 15N HSQC | ~2.0 mM Light Chain 1 protein, U-15N, 2.5 mM Tris.Cl pH 6.7, 100 mM NaCl; 90% H2O, 10% D2O. | 90% H2O/10% D2O | 6.7 | ambient | 298 | ||
| 2 | R1rho relaxation 15N HSQC | ~2.0 mM Light Chain 1 protein, U-15N, 2.5 mM Tris.Cl pH 6.7, 100 mM NaCl; 90% H2O, 10% D2O. | 90% H2O/10% D2O | 6.7 | ambient | 298 | ||
| 3 | 1H-15N NOE 15N HSQC | ~2.0 mM Light Chain 1 protein, U-15N, 2.5 mM Tris.Cl pH 6.7, 100 mM NaCl; 90% H2O, 10% D2O. | 90% H2O/10% D2O | 6.7 | ambient | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Varian | INOVA | 600 |
| 2 | Varian | INOVA | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| simulated annealing, molecular dynamics | Felix | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | all calculated structures submitted |
| Conformers Calculated Total Number | 15 |
| Conformers Submitted Total Number | 15 |
| Representative Model | 1 (closest to the average) |
| Additional NMR Experimental Information | |
|---|---|
| Details | using relaxation R2/R1 ratios as long range constraints to refine structure. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | Felix | 95.0 | |
| 2 | refinement | Discover | 2.98 | MSI Inc., San Diego |
| 3 | data analysis | TENSOR2 | 2 | |














