9QDI | pdb_00009qdi

Crystal structure of BF3526 peptidase from Bacteroides fragilis in complex with a peptide

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Metalloproteases (zincins), catalytic domain	8053827	3001975	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	IgA peptidase N-terminal domain-like	8053830	3002233	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF09471	IgA Peptidase M64 (Peptidase_M64)	IgA Peptidase M64	-	Family
A, B, C, D, E A, B, C, D, E, F, G, H	PF16217	Peptidase M64 N-terminus (M64_N)	Peptidase M64 N-terminus	This domain is found at the N-terminus of IgA Peptidase M64. Its function is unknown.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I, J, K, L	Synthetic peptide SER-THR-PRO-PRO	-	-	-
A, B, C, D, E A, B, C, D, E, F, G, H	Lipoprotein	peptidase activity catalytic activity, acting on a protein metallopeptidase activity hydrolase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR038171	Peptidase M64, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR024079	Metallopeptidase, catalytic domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR032625	Peptidase M64, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR019026	Peptidase M64, IgA	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.