9Q23 | pdb_00009q23

DX2-CX3-RAD51 structure in the intermediate state


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth G]SCOP2B SuperfamilyHelix-hairpin-helix tandem 8056645 3000163 SCOP2B (2022-06-29)
C [auth G]SCOP2B SuperfamilyRecA-like P-loop NTPases 8056644 3002019 SCOP2B (2022-06-29)
E [auth I]SCOP2B SuperfamilyRecA-like P-loop NTPases 8056644 3002019 SCOP2B (2022-06-29)
E [auth I]SCOP2B SuperfamilyHelix-hairpin-helix tandem 8056645 3000163 SCOP2B (2022-06-29)
B [auth D]SCOP2B SuperfamilyHelix-hairpin-helix tandem 8056646 3000163 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth G],
E [auth I]
PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
C [auth G],
E [auth I]
PF14520Helix-hairpin-helix domain (HHH_5)Helix-hairpin-helix domainDomain
G [auth X]PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
F [auth R]PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
F [auth R]PF26169XRCC3/RpoA-like, helix-hairpin-helix domain (HHH_XRCC3_RpoA)XRCC3/RpoA-like, helix-hairpin-helix domainThis domain is found at the N-terminal end of human DNA repair protein XRCC3 and similar proteins, and at the C-terminal end of plant DNA-directed RNA polymerase subunit alpha (RpoA). XRCC3 is involved in the homologous recombination repair pathway o ...This domain is found at the N-terminal end of human DNA repair protein XRCC3 and similar proteins, and at the C-terminal end of plant DNA-directed RNA polymerase subunit alpha (RpoA). XRCC3 is involved in the homologous recombination repair pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions. It is part of the RAD51 paralogue protein complex CX3 [5-7]. This domain is predicted to adopt an helix-hairpin-helix (HHH) fold.
Domain
B [auth D]PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain
A [auth C]PF08423Rad51 (Rad51)Rad51Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth G],
E [auth I]
DNA repair protein RAD51 homolog 1
G [auth X]DNA repair protein XRCC2
F [auth R]DNA repair protein XRCC3
D [auth H]ssDNA (6-mer)---
B [auth D]DNA repair protein RAD51 homolog 4
A [auth C]DNA repair protein RAD51 homolog 3

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth G],
E [auth I]
IPR020587DNA recombination and repair protein RecA, monomer-monomer interfaceDomain
C [auth G],
E [auth I]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth G],
E [auth I]
IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
C [auth G],
E [auth I]
IPR003593AAA+ ATPase domainDomain
C [auth G],
E [auth I]
IPR011941DNA recombination/repair protein Rad51Family
C [auth G],
E [auth I]
IPR016467DNA recombination and repair protein, RecA-likeFamily
C [auth G],
E [auth I]
IPR013632Rad51-like, C-terminalDomain
C [auth G],
E [auth I]
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helicalHomologous Superfamily
G [auth X]IPR030547DNA repair protein XRCC2Family
G [auth X]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
G [auth X]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
G [auth X]IPR013632Rad51-like, C-terminalDomain
F [auth R]IPR047348DNA repair protein XRCC3-like, C-terminalDomain
F [auth R]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth R]IPR016467DNA recombination and repair protein, RecA-likeFamily
F [auth R]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
F [auth R]IPR013632Rad51-like, C-terminalDomain
F [auth R]IPR058766XRCC3/RAD51 homolog 2, helix-hairpin-helix domainDomain
B [auth D]IPR051988Homologous Recombination Repair RAD51 ParalogFamily
B [auth D]IPR003593AAA+ ATPase domainDomain
B [auth D]IPR047323DNA repair protein RAD51 homolog 4, C-terminalDomain
B [auth D]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth D]IPR016467DNA recombination and repair protein, RecA-likeFamily
B [auth D]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
B [auth D]IPR013632Rad51-like, C-terminalDomain
B [auth D]IPR048943RAD51D, N-terminal domainDomain
A [auth C]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A [auth C]IPR016467DNA recombination and repair protein, RecA-likeFamily
A [auth C]IPR020588DNA recombination and repair protein RecA-like, ATP-binding domainDomain
A [auth C]IPR013632Rad51-like, C-terminalDomain
A [auth C]IPR052093Homologous Recombination Repair MediatorFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
C [auth G],
E [auth I]
PharosQ06609
G [auth X]PharosO43543
F [auth R]PharosO43542
B [auth D]PharosO75771
A [auth C]PharosO43502