9OIO | pdb_00009oio

The von Hippel Lindau-ElonginB-ElonginC (VCB) complex with fragments 9 and 14


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyVHL 8041313 3000841 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyVHL 8041313 3000841 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyVHL 8041313 3000841 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyVHL 8041313 3000841 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D, G, J
PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
B, E, H, K
PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domainDomain
C, F, L
PF17211VHL box domain (VHL_C)VHL box domainThis domain represents the short C-terminal alpha helical domain from the VHL protein [1]. Domain
C, F, L
PF01847VHL beta domain (VHL)VHL beta domainVHL forms a ternary complex with the elonginB Swiss:O44226 and elonginC Swiss:O13292 proteins. This complex binds Cul2, which then is involved in regulation of vascular endothelial growth factor Swiss:P15692 mRNA. Domain
PF17211VHL box domain (VHL_C)VHL box domainThis domain represents the short C-terminal alpha helical domain from the VHL protein [1]. Domain
PF01847VHL beta domain (VHL)VHL beta domainVHL forms a ternary complex with the elonginB Swiss:O44226 and elonginC Swiss:O13292 proteins. This complex binds Cul2, which then is involved in regulation of vascular endothelial growth factor Swiss:P15692 mRNA. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, D, G, J
Elongin-B
B, E, H, K
Elongin-C
C, F, L
von Hippel-Lindau disease tumor suppressor
von Hippel-Lindau disease tumor suppressor

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, D, G, J
PharosQ15370
B, E, H, K
PharosQ15369
C, F, L
PharosP40337
PharosP40337