Structural basis for translation termination on the 70S ribosome.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| IB [auth CB] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063836 | 3001397 | SCOP2B (2022-06-29) |
| E [auth AB] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8063836 | 3001397 | SCOP2B (2022-06-29) |
| KB [auth CD] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8093624 | 3001473 | SCOP2B (2022-06-29) |
| G [auth AD] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8093624 | 3001473 | SCOP2B (2022-06-29) |
| MB [auth CF] | SCOP2B Superfamily | Ribosomal protein S6 | 8098858 | 3001323 | SCOP2B (2022-06-29) |
| I [auth AF] | SCOP2B Superfamily | Ribosomal protein S6 | 8098858 | 3001323 | SCOP2B (2022-06-29) |
| NB [auth CG] | SCOP2B Superfamily | Ribosomal protein S7 | 8093626 | 3000799 | SCOP2B (2022-06-29) |
| J [auth AG] | SCOP2B Superfamily | Ribosomal protein S7 | 8093626 | 3000799 | SCOP2B (2022-06-29) |
| OB [auth CH] | SCOP2B Superfamily | Ribosomal protein S8 | 8098860 | 3000709 | SCOP2B (2022-06-29) |
| K [auth AH] | SCOP2B Superfamily | Ribosomal protein S8 | 8098860 | 3000709 | SCOP2B (2022-06-29) |
| PB [auth CI] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8093728 | 3000100 | SCOP2B (2022-06-29) |
| L [auth AI] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8093728 | 3000100 | SCOP2B (2022-06-29) |
| QB [auth CJ] | SCOP2B Superfamily | Ribosomal protein S10 | 8098850 | 3001336 | SCOP2B (2022-06-29) |
| M [auth AJ] | SCOP2B Superfamily | Ribosomal protein S10 | 8098850 | 3001336 | SCOP2B (2022-06-29) |
| RB [auth CK] | SCOP2B Superfamily | Translational machinery components | 8098852 | 3000571 | SCOP2B (2022-06-29) |
| N [auth AK] | SCOP2B Superfamily | Translational machinery components | 8098852 | 3000571 | SCOP2B (2022-06-29) |
| SB [auth CL] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8098824 | 3000135 | SCOP2B (2022-06-29) |
| O [auth AL] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8098824 | 3000135 | SCOP2B (2022-06-29) |
| TB [auth CM] | SCOP2B Superfamily | S13-like H2TH domain | 8098854 | 3000053 | SCOP2B (2022-06-29) |
| P [auth AM] | SCOP2B Superfamily | S13-like H2TH domain | 8098854 | 3000053 | SCOP2B (2022-06-29) |
| UB [auth CN] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052583 | 3000068 | SCOP2B (2022-06-29) |
| Q [auth AN] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052583 | 3000068 | SCOP2B (2022-06-29) |
| ZB [auth CS] | SCOP2B Superfamily | Ribosomal protein S19 | 8098856 | 3000686 | SCOP2B (2022-06-29) |
| V [auth AS] | SCOP2B Superfamily | Ribosomal protein S19 | 8098856 | 3000686 | SCOP2B (2022-06-29) |
| W [auth AT] | SCOP2B Superfamily | Ribosomal protein S20 | 8101559 | 3001362 | SCOP2B (2022-06-29) |
| AC [auth CT] | SCOP2B Superfamily | Ribosomal protein S20 | 8101559 | 3001362 | SCOP2B (2022-06-29) |
| KC [auth DN] | SCOP2B Superfamily | Ribosomal protein L13 | 8099906 | 3001134 | SCOP2B (2022-06-29) |
| IA [auth BN] | SCOP2B Superfamily | Ribosomal protein L13 | 8099906 | 3001134 | SCOP2B (2022-06-29) |
| LC [auth DO] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8093738 | 3000433 | SCOP2B (2022-06-29) |
| JA [auth BO] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8093738 | 3000433 | SCOP2B (2022-06-29) |
| MC [auth DP] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099902 | 3001045 | SCOP2B (2022-06-29) |
| KA [auth BP] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8099902 | 3001045 | SCOP2B (2022-06-29) |
| PC [auth DS] | SCOP2B Superfamily | Translational machinery components | 8074014 | 3000571 | SCOP2B (2022-06-29) |
| NA [auth BS] | SCOP2B Superfamily | Translational machinery components | 8074014 | 3000571 | SCOP2B (2022-06-29) |
| RC [auth DU] | SCOP2B Superfamily | Ribosomal protein L20 | 8093660 | 3000563 | SCOP2B (2022-06-29) |
| PA [auth BU] | SCOP2B Superfamily | Ribosomal protein L20 | 8093660 | 3000563 | SCOP2B (2022-06-29) |
| SC [auth DV] | SCOP2B Superfamily | l21p-like | 8093656 | 3002005 | SCOP2B (2022-06-29) |
| QA [auth BV] | SCOP2B Superfamily | l21p-like | 8093656 | 3002005 | SCOP2B (2022-06-29) |
| TC [auth DW] | SCOP2B Superfamily | Ribosomal protein L22 | 8099898 | 3001078 | SCOP2B (2022-06-29) |
| RA [auth BW] | SCOP2B Superfamily | Ribosomal protein L22 | 8099898 | 3001078 | SCOP2B (2022-06-29) |
| UC [auth DX] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8099896 | 3000210 | SCOP2B (2022-06-29) |
| SA [auth BX] | SCOP2B Superfamily | Ribosomal proteins S24e, L23 and L15e | 8099896 | 3000210 | SCOP2B (2022-06-29) |
| ZC [auth D2] | SCOP2B Superfamily | Ribosomal protein L29 (L29p) | 8076744 | 3000713 | SCOP2B (2022-06-29) |
| XA [auth B2] | SCOP2 Family | Ribosomal protein L29 (L29p) | 8076743 | 4000600 | SCOP2 (2022-06-29) |
| XA [auth B2] | SCOP2 Superfamily | Ribosomal protein L29 (L29p) | 8076744 | 3000713 | SCOP2 (2022-06-29) |
| YA [auth B3] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8099900 | 3001378 | SCOP2B (2022-06-29) |
| AD [auth D3] | SCOP2B Superfamily | Ribosomal protein L30p/L7e | 8099900 | 3001378 | SCOP2B (2022-06-29) |
| CD [auth D5] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8081579 | 3001320 | SCOP2B (2022-06-29) |
| AB [auth B5] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8081579 | 3001320 | SCOP2B (2022-06-29) |
| DD [auth D6] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099892 | 3001320 | SCOP2B (2022-06-29) |
| BB [auth B6] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8099892 | 3001320 | SCOP2B (2022-06-29) |
| FD [auth D8] | SCOP2B Superfamily | L35p-like | 8099912 | 3000790 | SCOP2B (2022-06-29) |
| DB [auth B8] | SCOP2B Superfamily | L35p-like | 8099912 | 3000790 | SCOP2B (2022-06-29) |
| EC [auth DE] | SCOP2B Superfamily | Translational proteins | 8089140 | 3000811 | SCOP2B (2022-06-29) |
| CA [auth BE] | SCOP2B Superfamily | Translational proteins | 8089140 | 3000811 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| IB [auth CB] | Ribosomal_S2 | e4v63CB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: Ribosomal_S2 | ECOD (1.6) |
| E [auth AB] | Ribosomal_S2 | e4v63AB1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: Ribosomal_S2 | ECOD (1.6) |
| JB [auth CC] | Ribosomal_S3_C | e4v63CC1 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: Ribosomal_S3_C | ECOD (1.6) |
| JB [auth CC] | KH_2_1 | e4v63CC2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: KH_2_1 | ECOD (1.6) |
| F [auth AC] | Ribosomal_S3_C | e4v63AC1 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: Ribosomal_S3_C | ECOD (1.6) |
| F [auth AC] | KH_2_1 | e4v63AC2 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: KH_2_1 | ECOD (1.6) |
| KB [auth CD] | S4 | e4v63CD1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: S4 | ECOD (1.6) |
| G [auth AD] | S4 | e4v63AD1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: S4 | ECOD (1.6) |
| LB [auth CE] | Ribosomal_S5_C | e4v63CE2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S5_C | ECOD (1.6) |
| LB [auth CE] | Ribosomal_S5 | e4v63CE1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: Ribosomal_S5 | ECOD (1.6) |
| H [auth AE] | Ribosomal_S5_C | e4v63AE2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S5_C | ECOD (1.6) |
| H [auth AE] | Ribosomal_S5 | e4v63AE1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: Ribosomal_S5 | ECOD (1.6) |
| MB [auth CF] | Ribosomal_S6 | e4v63CF1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
| I [auth AF] | Ribosomal_S6 | e4v63AF1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S6 (From Topology) | T: Ribosomal protein S6 | F: Ribosomal_S6 | ECOD (1.6) |
| NB [auth CG] | Ribosomal_S7_1 | e4v63CG1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: Ribosomal_S7_1 | ECOD (1.6) |
| J [auth AG] | Ribosomal_S7_1 | e4v63AG1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: Ribosomal_S7_1 | ECOD (1.6) |
| OB [auth CH] | Ribosomal_S8_N | e4v63CH1 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: Ribosomal_S8_N | ECOD (1.6) |
| OB [auth CH] | Ribosomal_S8_C | e4v63CH2 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: Ribosomal_S8_C | ECOD (1.6) |
| K [auth AH] | Ribosomal_S8_N | e4v63AH1 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: Ribosomal_S8_N | ECOD (1.6) |
| K [auth AH] | Ribosomal_S8_C | e4v63AH2 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: Ribosomal_S8_C | ECOD (1.6) |
| PB [auth CI] | Ribosomal_S9 | e4v63CI1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S9 | ECOD (1.6) |
| L [auth AI] | Ribosomal_S9 | e4v63AI1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: Ribosomal_S9 | ECOD (1.6) |
| QB [auth CJ] | Ribosomal_S10 | e4v63CJ1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10 | ECOD (1.6) |
| M [auth AJ] | Ribosomal_S10 | e4v63AJ1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10 | ECOD (1.6) |
| RB [auth CK] | Ribosomal_S11 | e4v63CK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_S11 | ECOD (1.6) |
| N [auth AK] | Ribosomal_S11 | e4v63AK1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_S11 | ECOD (1.6) |
| SB [auth CL] | Ribosom_S12_S23 | e4v63CL1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
| O [auth AL] | Ribosom_S12_S23 | e4v63AL1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosom_S12_S23 | ECOD (1.6) |
| TB [auth CM] | Ribosomal_S13_1 | e4v63CM1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: Ribosomal_S13_1 | ECOD (1.6) |
| P [auth AM] | Ribosomal_S13_1 | e4v63AM1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: Ribosomal_S13_1 | ECOD (1.6) |
| UB [auth CN] | Ribosomal_S14 | e4v63CN1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S14 | ECOD (1.6) |
| Q [auth AN] | Ribosomal_S14 | e4v63AN1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: Ribosomal_S14 | ECOD (1.6) |
| WB [auth CP] | Ribosomal_S16_1 | e4v63CP1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: Ribosomal_S16_1 | ECOD (1.6) |
| S [auth AP] | Ribosomal_S16_1 | e4v63AP1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: Ribosomal_S16_1 | ECOD (1.6) |
| XB [auth CQ] | Ribosomal_S17_1 | e4v63CQ1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S17_1 | ECOD (1.6) |
| T [auth AQ] | Ribosomal_S17_1 | e4v63AQ1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_S17_1 | ECOD (1.6) |
| YB [auth CR] | Ribosomal_S18 | e4v63CR1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
| U [auth AR] | Ribosomal_S18 | e4v63AR1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
| ZB [auth CS] | Ribosomal_S19 | e4v63CS1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: Ribosomal_S19 | ECOD (1.6) |
| V [auth AS] | Ribosomal_S19 | e4v63AS1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: Ribosomal_S19 | ECOD (1.6) |
| W [auth AT] | Ribosomal_S20p | e4v63AT1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: Ribosomal_S20p | ECOD (1.6) |
| AC [auth CT] | Ribosomal_S20p | e4v63CT1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: Ribosomal_S20p | ECOD (1.6) |
| Y [auth AX] | PCRF_N | e4v63AX3 | A: alpha bundles | X: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology) | H: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology) | T: Release factor (Pfam 00472) N-terminal alpha helical domain | F: PCRF_N | ECOD (1.6) |
| Y [auth AX] | PCRF_C | e4v63AX2 | A: a+b two layers | X: Alpha-beta plaits | H: Ferredoxin-like domain in release factor (From Topology) | T: Ferredoxin-like domain in release factor | F: PCRF_C | ECOD (1.6) |
| Y [auth AX] | RF-1_N | e4v63AX1 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_N | ECOD (1.6) |
| Y [auth AX] | RF-1_C | e4v63AX4 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_C | ECOD (1.6) |
| CC [auth CX] | PCRF_N | e4v63CX3 | A: alpha bundles | X: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology) | H: Release factor (Pfam 00472) N-terminal alpha helical domain (From Topology) | T: Release factor (Pfam 00472) N-terminal alpha helical domain | F: PCRF_N | ECOD (1.6) |
| CC [auth CX] | PCRF_C | e4v63CX2 | A: a+b two layers | X: Alpha-beta plaits | H: Ferredoxin-like domain in release factor (From Topology) | T: Ferredoxin-like domain in release factor | F: PCRF_C | ECOD (1.6) |
| CC [auth CX] | RF-1_N | e4v63CX1 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_N | ECOD (1.6) |
| CC [auth CX] | RF-1_C | e4v63CX4 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_C | ECOD (1.6) |
| DC [auth DD] | Ribosomal_L2_1 | e4v63DD2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2_1 | ECOD (1.6) |
| DC [auth DD] | Ribosomal_L2_C | e4v63DD1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C | ECOD (1.6) |
| BA [auth BD] | Ribosomal_L2_1 | e4v63BD2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2_1 | ECOD (1.6) |
| BA [auth BD] | Ribosomal_L2_C | e4v63BD1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C | ECOD (1.6) |
| FC [auth DF] | Ribosomal_L4 | e4v63DF1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
| DA [auth BF] | Ribosomal_L4 | e4v63BF1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
| GC [auth DG] | Ribosomal_L5_C | e4v63DG1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: Ribosomal_L5_C | ECOD (1.6) |
| EA [auth BG] | Ribosomal_L5_C | e4v63BG1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: Ribosomal_L5_C | ECOD (1.6) |
| HC [auth DH] | Ribosomal_L6 | e4v63DH2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6 | ECOD (1.6) |
| HC [auth DH] | Ribosomal_L6_1 | e4v63DH1 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6_1 | ECOD (1.6) |
| FA [auth BH] | Ribosomal_L6 | e4v63BH2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6 | ECOD (1.6) |
| FA [auth BH] | Ribosomal_L6_1 | e4v63BH1 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: Ribosomal_L6_1 | ECOD (1.6) |
| IC [auth DI] | Ribosomal_L9_N | e4v63DI2 | A: a+b two layers | X: L9 N-domain-like | H: L9 N-domain-like (From Topology) | T: L9 N-domain-like | F: Ribosomal_L9_N | ECOD (1.6) |
| IC [auth DI] | Ribosomal_L9_C | e4v63DI1 | A: a+b two layers | X: Ribosomal protein L9 C-domain (From Topology) | H: Ribosomal protein L9 C-domain (From Topology) | T: Ribosomal protein L9 C-domain | F: Ribosomal_L9_C | ECOD (1.6) |
| GA [auth BI] | Ribosomal_L9_N | e4v63BI2 | A: a+b two layers | X: L9 N-domain-like | H: L9 N-domain-like (From Topology) | T: L9 N-domain-like | F: Ribosomal_L9_N | ECOD (1.6) |
| GA [auth BI] | Ribosomal_L9_C | e4v63BI1 | A: a+b two layers | X: Ribosomal protein L9 C-domain (From Topology) | H: Ribosomal protein L9 C-domain (From Topology) | T: Ribosomal protein L9 C-domain | F: Ribosomal_L9_C | ECOD (1.6) |
| KC [auth DN] | Ribosomal_L13 | e4v63DN1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
| IA [auth BN] | Ribosomal_L13 | e4v63BN1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
| LC [auth DO] | Ribosomal_L14 | e4v63DO1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
| JA [auth BO] | Ribosomal_L14 | e4v63BO1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
| MC [auth DP] | Ribosomal_L27A | e4v63DP1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L27A | ECOD (1.6) |
| KA [auth BP] | Ribosomal_L27A | e4v63BP1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L27A | ECOD (1.6) |
| NC [auth DQ] | Ribosomal_L16 | e4v63DQ1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
| LA [auth BQ] | Ribosomal_L16 | e4v63BQ1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
| OC [auth DR] | Ribosomal_L17_1 | e4v63DR1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: Ribosomal_L17_1 | ECOD (1.6) |
| MA [auth BR] | Ribosomal_L17_1 | e4v63BR1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: Ribosomal_L17_1 | ECOD (1.6) |
| PC [auth DS] | Ribosomal_L18p | e4v63DS1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L18p | ECOD (1.6) |
| NA [auth BS] | Ribosomal_L18p | e4v63BS1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L18p | ECOD (1.6) |
| QC [auth DT] | Ribosomal_L19 | e4v63DT1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L19 | ECOD (1.6) |
| OA [auth BT] | Ribosomal_L19 | e4v63BT1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L19 | ECOD (1.6) |
| RC [auth DU] | Ribosomal_L20 | e4v63DU1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: Ribosomal_L20 | ECOD (1.6) |
| PA [auth BU] | Ribosomal_L20 | e4v63BU1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: Ribosomal_L20 | ECOD (1.6) |
| SC [auth DV] | Ribosomal_L21p | e4v63DV1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: Ribosomal_L21p | ECOD (1.6) |
| QA [auth BV] | Ribosomal_L21p | e4v63BV1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: Ribosomal_L21p | ECOD (1.6) |
| TC [auth DW] | Ribosomal_L22 | e4v63DW1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
| RA [auth BW] | Ribosomal_L22 | e4v63BW1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
| UC [auth DX] | Ribosomal_L23_2 | e4v63DX1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_2 | ECOD (1.6) |
| SA [auth BX] | Ribosomal_L23_2 | e4v63BX1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_2 | ECOD (1.6) |
| VC [auth DY] | ribosomal_L24 | e4v63DY1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: ribosomal_L24 | ECOD (1.6) |
| TA [auth BY] | ribosomal_L24 | e4v63BY1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: ribosomal_L24 | ECOD (1.6) |
| WC [auth DZ] | Ribosomal_L25p | e4v63DZ1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: Ribosomal_L25p | ECOD (1.6) |
| WC [auth DZ] | Ribosomal_TL5_C | e4v63DZ2 | A: a+b complex topology | X: Ribosomal protein TL5/L25 C-terminal domain-like | H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology) | T: Ribosomal protein TL5/L25 C-terminal domain-related | F: Ribosomal_TL5_C | ECOD (1.6) |
| UA [auth BZ] | Ribosomal_L25p | e4v63BZ1 | A: beta barrels | X: Ribosomal protein L25-like | H: Ribosomal protein L25-like (From Topology) | T: Ribosomal protein L25-like | F: Ribosomal_L25p | ECOD (1.6) |
| UA [auth BZ] | Ribosomal_TL5_C | e4v63BZ2 | A: a+b complex topology | X: Ribosomal protein TL5/L25 C-terminal domain-like | H: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology) | T: Ribosomal protein TL5/L25 C-terminal domain-related | F: Ribosomal_TL5_C | ECOD (1.6) |
| YC [auth D1] | Ribosomal_L28 | e4v63D11 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: Ribosomal_L28 | ECOD (1.6) |
| WA [auth B1] | Ribosomal_L28 | e4v63B11 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: Ribosomal_L28 | ECOD (1.6) |
| ZC [auth D2] | Ribosomal_L29 | e4v63D21 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: Ribosomal_L29 | ECOD (1.6) |
| XA [auth B2] | Ribosomal_L29 | e4v63B21 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: Ribosomal_L29 | ECOD (1.6) |
| YA [auth B3] | Ribosomal_L30 | e4v63B31 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30 | ECOD (1.6) |
| AD [auth D3] | Ribosomal_L30 | e4v63D31 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30 | ECOD (1.6) |
| CD [auth D5] | Ribosomal_L32p | e4v63D51 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L32p | ECOD (1.6) |
| AB [auth B5] | Ribosomal_L32p | e4v63B51 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L32p | ECOD (1.6) |
| DD [auth D6] | Ribosomal_L33 | e4v63D61 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L33 | ECOD (1.6) |
| BB [auth B6] | Ribosomal_L33 | e4v63B61 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L33 | ECOD (1.6) |
| ED [auth D7] | Ribosomal_L34 | e4v63D71 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: Ribosomal_L34 | ECOD (1.6) |
| CB [auth B7] | Ribosomal_L34 | e4v63B71 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: Ribosomal_L34 | ECOD (1.6) |
| FD [auth D8] | Ribosomal_L35p | e4v63D81 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: Ribosomal_L35p | ECOD (1.6) |
| DB [auth B8] | Ribosomal_L35p | e4v63B81 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: Ribosomal_L35p | ECOD (1.6) |
| ZA [auth B4] | Ribosomal_L31 | e4v63B41 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: Ribosomal_L31 | ECOD (1.6) |
| BD [auth D4] | Ribosomal_L31 | e4v63D41 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: Ribosomal_L31 | ECOD (1.6) |
| XC [auth D0] | Ribosomal_L27 | e4v63D01 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: Ribosomal_L27 | ECOD (1.6) |
| VA [auth B0] | Ribosomal_L27 | e4v63B01 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: Ribosomal_L27 | ECOD (1.6) |
| EC [auth DE] | Ribosomal_L3 | e4v63DE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
| CA [auth BE] | Ribosomal_L3 | e4v63BE1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
| VB [auth CO] | Ribosomal_S15_1 | e4v63CO1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
| R [auth AO] | Ribosomal_S15_1 | e4v63AO1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: Ribosomal_S15_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| E [auth AB], IB [auth CB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| F [auth AC], JB [auth CC] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| F [auth AC], JB [auth CC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| G [auth AD], KB [auth CD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| G [auth AD], KB [auth CD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| H [auth AE], LB [auth CE] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| H [auth AE], LB [auth CE] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| I [auth AF], MB [auth CF] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| K [auth AH], OB [auth CH] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| L [auth AI], PB [auth CI] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| M [auth AJ], QB [auth CJ] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| N [auth AK], RB [auth CK] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| O [auth AL], SB [auth CL] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| P [auth AM], TB [auth CM] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| Q [auth AN], UB [auth CN] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| S [auth AP], WB [auth CP] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| T [auth AQ], XB [auth CQ] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| U [auth AR], YB [auth CR] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| CC [auth CX], Y [auth AX] | PF03462 | PCRF domain (PCRF) | PCRF domain | This domain is found in peptide chain release factors. | Domain |
| CC [auth CX], Y [auth AX] | PF00472 | RF-1 domain (RF-1) | RF-1 domain | This domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domai ... | Domain |
| BA [auth BD], DC [auth DD] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| BA [auth BD], DC [auth DD] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| DA [auth BF], FC [auth DF] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| EA [auth BG], GC [auth DG] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| EA [auth BG], GC [auth DG] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| FA [auth BH], HC [auth DH] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| GA [auth BI], IC [auth DI] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| GA [auth BI], IC [auth DI] | PF03948 | Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C) | Ribosomal protein L9, C-terminal domain | Domain | |
| IA [auth BN], KC [auth DN] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| JA [auth BO], LC [auth DO] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| KA [auth BP], MC [auth DP] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| MA [auth BR], OC [auth DR] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| OA [auth BT], QC [auth DT] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| PA [auth BU], RC [auth DU] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| QA [auth BV], SC [auth DV] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| RA [auth BW], TC [auth DW] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| SA [auth BX], UC [auth DX] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| TA [auth BY], VC [auth DY] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| TA [auth BY], VC [auth DY] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| UA [auth BZ], WC [auth DZ] | PF14693 | Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C) | Ribosomal protein TL5, C-terminal domain | This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ... | Domain |
| UA [auth BZ], WC [auth DZ] | PF01386 | Ribosomal L25p family (Ribosomal_L25p) | Ribosomal L25p family | Ribosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. | Domain |
| XA [auth B2], ZC [auth D2] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| AD [auth D3], YA [auth B3] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| AB [auth B5], CD [auth D5] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| CB [auth B7], ED [auth D7] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| DB [auth B8], FD [auth D8] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| CA [auth BE], EC [auth DE] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| R [auth AO], VB [auth CO] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain |














