4FEX | pdb_00004fex

Crystal structure of the aminoglycoside phosphotransferase APH(3')-Ia, with substrate kanamycin and small molecule inhibitor tyrphostin AG1478

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4fexa_ Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) automated matches automated matches (Acinetobacter baumannii AYE ) [TaxId: 509173 ], SCOPe (2.08)
Bd4fexb_ Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) automated matches automated matches (Acinetobacter baumannii AYE ) [TaxId: 509173 ], SCOPe (2.08)
Cd4fexc_ Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) automated matches automated matches (Acinetobacter baumannii AYE ) [TaxId: 509173 ], SCOPe (2.08)
Dd4fexd_ Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) automated matches automated matches (Acinetobacter baumannii AYE ) [TaxId: 509173 ], SCOPe (2.08)
Ed4fexe_ Alpha and beta proteins (a+b) Protein kinase-like (PK-like) Protein kinase-like (PK-like) automated matches automated matches (Acinetobacter baumannii AYE ) [TaxId: 509173 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARRM_1e4fexA1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
BRRM_1e4fexB1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
CRRM_1e4fexC1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
DRRM_1e4fexD1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)
ERRM_1e4fexE1 A: a/b three-layered sandwichesX: beta-GraspH: HTHT: winged helix domainF: RRM_1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (4.3.0)
A3.90.1200.10 Alpha Beta Alpha-Beta Complex Aminoglycoside 3'-phosphotransferase Chain: A, domain 2CATH (4.3.0)
B3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (4.3.0)
B3.90.1200.10 Alpha Beta Alpha-Beta Complex Aminoglycoside 3'-phosphotransferase Chain: A, domain 2CATH (4.3.0)
C3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (4.3.0)
C3.90.1200.10 Alpha Beta Alpha-Beta Complex Aminoglycoside 3'-phosphotransferase Chain: A, domain 2CATH (4.3.0)
D3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (4.3.0)
D3.90.1200.10 Alpha Beta Alpha-Beta Complex Aminoglycoside 3'-phosphotransferase Chain: A, domain 2CATH (4.3.0)
E3.30.200.20 Alpha Beta 2-Layer Sandwich Phosphorylase Kinase domain 1CATH (4.3.0)
E3.90.1200.10 Alpha Beta Alpha-Beta Complex Aminoglycoside 3'-phosphotransferase Chain: A, domain 2CATH (4.3.0)

AMR Gene: CARD Annotation CARD Database Homepage

ChainsAccessionShort NameDescriptionProvenance Source (Version)
A, B, C, D, E
ARO:3002641APH(3')-IaAPH(3')-Ia is a transposon-encoded aminoglycoside phosphotransferase in E. coli and S. enterica. It is identical at the protein sequence to APH(3')-Ic, an aminoglycoside phosphotransferase encoded by plasmids, transposons and genomic islands in K. pneumoniae, A. baumannii, S. marcescens, Corynebacterium spp., Photobacterium spp. and Citrobacter spp.CARD (4.0.1)

AMR Gene Family: CARD Annotation CARD Database Homepage

ChainsAccessionGene FamilyDrug Class Resistance MachanismProvenance Source (Version)
A, B, C, D, E
ARO:3000126APH(3')aminoglycoside antibioticantibiotic inactivationCARD (4.0.1)