45LQ | pdb_000045lq

Crystal structure of Escherichia coli YidC in complex with YibN

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Galactose mutarotase-like	8101843	3000035	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	YidC transmembrane domain-like	8101842	3002720	SCOP2B (2022-06-29)
B [auth D]	SCOP2B Superfamily	Galactose mutarotase-like	8101843	3000035	SCOP2B (2022-06-29)
B [auth D]	SCOP2B Superfamily	YidC transmembrane domain-like	8101842	3002720	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B [auth D]	PF14849	YidC periplasmic domain (YidC_periplas)	YidC periplasmic domain	This is the periplasmic domain of YidC, a bacterial membrane protein which is required for the insertion and assembly of inner membrane proteins [1,2].	Domain
A, B [auth D]	PF02096	60Kd inner membrane protein (60KD_IMP)	60Kd inner membrane protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D [auth C], F	YibN	oxidoreductase activity catalytic activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
C [auth B], E	Membrane protein insertase YidC	membrane insertase activity protein carrier activity molecular carrier activity	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis protein folding biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process gene expression cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis protein folding biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation membrane organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization localization macromolecule localization intracellular protein localization protein insertion into membrane transport protein transport by the Sec complex transmembrane transport protein transmembrane transport protein transport	cellular anatomical structure membrane cell periphery plasma membrane protein-containing complex cell envelope Sec protein transport complex intracellular protein-containing complex
A, B [auth D]	Membrane protein insertase YidC	membrane insertase activity protein carrier activity molecular carrier activity	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis protein folding biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process gene expression cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis protein folding biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation membrane organization establishment of protein localization cellular localization establishment of protein localization to membrane localization within membrane establishment of localization localization macromolecule localization intracellular protein localization protein insertion into membrane transport protein transport by the Sec complex transmembrane transport protein transmembrane transport protein transport	cellular anatomical structure membrane cell periphery plasma membrane protein-containing complex cell envelope Sec protein transport complex intracellular protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D [auth C], F	IPR001763	Rhodanese-like domain	Domain
D [auth C], F	IPR036873	Rhodanese-like domain superfamily	Homologous Superfamily
D [auth C], F	IPR050229	Thiosulfate sulfurtransferase GlpE	Family
C [auth B], E	IPR047196	Membrane insertase YidC/ALB, C-terminal	Domain
C [auth B], E	IPR019998	Membrane insertase YidC	Family
C [auth B], E	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	Family
C [auth B], E	IPR028053	Membrane insertase YidC, N-terminal	Domain
C [auth B], E	IPR028055	Membrane insertase YidC/Oxa/ALB, C-terminal	Domain
C [auth B], E	IPR038221	YidC, periplasmic domain superfamily	Homologous Superfamily
A, B [auth D]	IPR047196	Membrane insertase YidC/ALB, C-terminal	Domain
A, B [auth D]	IPR019998	Membrane insertase YidC	Family
A, B [auth D]	IPR001708	Membrane insertase YidC/ALB3/OXA1/COX18	Family
A, B [auth D]	IPR028053	Membrane insertase YidC, N-terminal	Domain
A, B [auth D]	IPR028055	Membrane insertase YidC/Oxa/ALB, C-terminal	Domain
A, B [auth D]	IPR038221	YidC, periplasmic domain superfamily	Homologous Superfamily