3LYQ | pdb_00003lyq

Crystal structure of IpgB2 from Shigella flexneri

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	SopE-like GEF domain	8092767	3001205	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	SopE-like GEF domain	8092767	3001205	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	IpaB_EvcA	e3lyqB1	A: alpha arrays	X: SopE-like GEF domain (From Topology)	H: SopE-like GEF domain (From Topology)	T: SopE-like GEF domain	F: IpaB_EvcA	ECOD (1.6)
A	IpaB_EvcA	e3lyqA1	A: alpha arrays	X: SopE-like GEF domain (From Topology)	H: SopE-like GEF domain (From Topology)	T: SopE-like GEF domain	F: IpaB_EvcA	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	1.10.4120.20	Mainly Alpha	Orthogonal Bundle	SopE-like GEF fold		CATH (4.3.0)
A	1.10.4120.20	Mainly Alpha	Orthogonal Bundle	SopE-like GEF fold		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF03278	IpaB/EvcA family (IpaB_EvcA)	IpaB/EvcA family	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR004959	Bacterial effector protein IpgB-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.