1WBI | pdb_00001wbi

AVR2

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d1wbih_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
G	d1wbig_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
F	d1wbif_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
E	d1wbie_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
D	d1wbid_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
C	d1wbic_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
B	d1wbib_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)
A	d1wbia_	All beta proteins	Streptavidin-like	Avidin/streptavidin	Avidin/streptavidin	automated matches	CHICKEN (Gallus gallus ) [TaxId: 9031 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2B (2022-06-29)
A	SCOP2 Family	Avidin/streptavidin	8070805	4002597	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Avidin/streptavidin	8070806	3001465	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Avidin	e1wbiH1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)
G	Avidin	e1wbiG1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)
F	Avidin	e1wbiF1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)
E	Avidin	e1wbiE1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)
D	Avidin	e1wbiD1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)
C	Avidin	e1wbiC1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)
B	Avidin	e1wbiB1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)
A	Avidin	e1wbiA1	A: beta barrels	X: Lipocalins/Streptavidin	H: Avidin/Streptavidin (From Topology)	T: Avidin/Streptavidin	F: Avidin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)
G	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)
F	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)
E	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)
D	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)
C	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)
B	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)
A	2.40.128.30	Mainly Beta	Beta Barrel	Lipocalin	Avidin-like	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF01382	Avidin family (Avidin)	Avidin family		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	AVIDIN-RELATED PROTEIN 2	biotin binding amide binding organic acid binding binding vitamin binding ion binding anion binding carboxylic acid binding heterocyclic compound binding monocarboxylic acid binding small molecule binding sulfur compound binding	organic anion transport nitrogen compound transport carboxylic acid transport transport vitamin transport biotin transport establishment of localization organic acid transport localization monocarboxylic acid transport amide transport sulfur compound transport	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR017889	Avidin-like, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, H	IPR036896	Avidin-like superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H	IPR051764	Avidin/Streptavidin-related	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR005468	Avidin/streptavidin	Family
A, B, C, D, E A, B, C, D, E, F, G, H	IPR005469	Avidin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.